RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 PSKH2Q96QS6 385 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 OSBPL8Q9BZF1 889 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 BRD8Q9H0E9 1235 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 SLC6A17Q9H1V8 727 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 WASF2Q9Y6W5 498 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 USP27XA6NNY8 438 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 APOC4-APOC2K7ER74 178 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 MATN3O15232 486 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 HRO43593 1189 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 ZNF500O60304 480 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-206ENST00000531480 ZNF217O75362 1048 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 APOC2P02655 101 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 CTSLP07711 333 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 NBL1P41271 181 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 SLC10A7Q0GE19 358 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 PDK1Q15118 436 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 CST6Q15828 149 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 ALG1LQ6GMV1 187 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 TIGD7Q6NT04 549 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-206ENST00000531480 LEKR1Q6ZMV7 388 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 USP30Q70CQ3 517 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 BZW1Q7L1Q6 419 aaKnown RBP14.7□□□□□ -0.06
CPSF1-206ENST00000531480 DSG4Q86SJ6 1040 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 ZNF354CQ86Y25 554 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 CCDC50Q8IVM0 306 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 GAB3Q8WWW8 586 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 PRCCQ92733 491 aaPredicted RBP14.7□□□□□ -0.06
CPSF1-206ENST00000531480 LRIG1Q96JA1 1093 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 CPEB1Q9BZB8 566 aaKnown RBP14.7□□□□□ -0.06
CPSF1-206ENST00000531480 CARD9Q9H257 536 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 TNKS2Q9H2K2 1166 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 PABPC3Q9H361 631 aaKnown RBP14.7□□□□□ -0.06
CPSF1-206ENST00000531480 SP110Q9HB58 689 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 AMACRQ9UHK6 382 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 SARDHQ9UL12 918 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 JRKLQ9Y4A0 524 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 ANKRD36A6QL64 1941 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 CEP192Q8TEP8 1941 aa14.7□□□□□ -0.06
CPSF1-206ENST00000531480 USP34Q70CQ2 3546 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 TNRC6BQ9UPQ9 1833 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 PROB1E7EW31 1015 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 ZBTB24O43167 697 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 RNASEH1O60930 286 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 ADH1BP00325 375 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 PECAM1P16284 738 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 CR2P20023 1033 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 C5AR1P21730 350 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 CHRNA3P32297 505 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 HSPA9P38646 679 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 TPMTP51580 245 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 CCNHP51946 323 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 SNRPD1P62314 119 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 XRCC4Q13426 336 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 BYSLQ13895 437 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 LBRQ14739 615 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 PRKD1Q15139 912 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 RPS6KA1Q15418 735 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 USP39Q53GS9 565 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 HEATR6Q6AI08 1181 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 AADACL2Q6P093 401 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 ZC3H14Q6PJT7 736 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 NPNTQ6UXI9 565 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 MMAAQ8IVH4 418 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 CHST14Q8NCH0 376 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 ZC3H10Q96K80 434 aaKnown RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 GDAP1L1Q96MZ0 367 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 MGME1Q9BQP7 344 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 HEPHQ9BQS7 1158 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 TPSD1Q9BZJ3 242 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 EPC1Q9H2F5 836 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 BCCIPQ9P287 314 aaKnown RBP eCLIP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 SEPT3Q9UH03 358 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
CPSF1-206ENST00000531480 HEY1Q9Y5J3 304 aa14.69□□□□□ -0.06
CPSF1-206ENST00000531480 ABCA7Q8IZY2 2146 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 IGHV1OR15-9A0A0B4J2B8 117 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 RNF103O00237 685 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 MUSKO15146 869 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 KIF5CO60282 957 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 TJP3O95049 919 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 MAP3K6O95382 1288 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 POP4O95707 220 aaKnown RBP14.68□□□□□ -0.06
CPSF1-206ENST00000531480 PRNPP04156 253 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 DRD3P35462 400 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 CETN2P41208 172 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 RECQLP46063 649 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-206ENST00000531480 RGRP47804 291 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 RENBPP51606 427 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 RHOAP61586 193 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 IFI35P80217 286 aaPredicted RBP14.68□□□□□ -0.06
CPSF1-206ENST00000531480 NOMO1Q15155 1222 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 MYLK3Q32MK0 819 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 RALGPS1Q5JS13 557 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 MARC1Q5VT66 337 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 KAZNQ674X7 775 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 ASCL5Q7RTU5 278 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 KBTBD6Q86V97 674 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 C11orf74Q86VG3 221 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 CCDC13Q8IYE1 715 aa14.68□□□□□ -0.06
CPSF1-206ENST00000531480 PGBD5Q8N414 524 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms