RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PATL1Q86TB9 770 aaKnown RBP4.61□□□□□ -1.67
PTPRK-220ENST00000531466 MYPOPQ86VE0 399 aaPredicted RBP4.61□□□□□ -1.67
PTPRK-220ENST00000531466 C2CD4CQ8TF44 421 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 C18orf8Q96DM3 657 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 FEM1CQ96JP0 617 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 DUX3Q96PT4 197 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 NPAS1Q99742 590 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 NPFFR1Q9GZQ6 430 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 OSGIN2Q9Y236 505 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 IGHV4OR15-8A0A075B7B6 117 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 TMEM247A6NEH6 219 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 RASA4BC9J798 803 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 GRM8O00222 908 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 LARGE1O95461 756 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 RPL3P39023 403 aaKnown RBP4.6□□□□□ -1.67
PTPRK-220ENST00000531466 CYP4A11Q02928 519 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 CDK18Q07002 472 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 TROAPQ12815 778 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 DGLUCYQ7Z3D6 616 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 RBFAQ8N0V3 343 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 FAM177A1Q8N128 213 aaPredicted RBP4.6□□□□□ -1.67
PTPRK-220ENST00000531466 BRI3BPQ8WY22 251 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 KCNJ9Q92806 393 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 PRPF18Q99633 342 aaKnown RBP4.6□□□□□ -1.67
PTPRK-220ENST00000531466 MSTO1Q9BUK6 570 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 TRMT61BQ9BVS5 477 aaKnown RBP4.6□□□□□ -1.67
PTPRK-220ENST00000531466 PDE11AQ9HCR9 933 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 TM7SF3Q9NS93 570 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
PTPRK-220ENST00000531466 IGKV3D-20A0A0C4DH25 116 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 FAM172BPA6NC97 362 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 P2RY10O00398 339 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 HNRNPDLO14979 420 aaKnown RBP4.59□□□□□ -1.67
PTPRK-220ENST00000531466 ZNF883P0CG24 379 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 KCNA5P22460 613 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 SSTR2P30874 369 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 DPP6P42658 865 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 ZNF132P52740 706 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 NLRP5P59047 1200 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 GXYLT1Q4G148 440 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 TMEM268Q5VZI3 342 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 FOXL2NBQ6ZUU3 175 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 KBTBD3Q8NAB2 608 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 ZNF385AQ96PM9 386 aaKnown RBP4.59□□□□□ -1.67
PTPRK-220ENST00000531466 SEPSECSQ9HD40 501 aaKnown RBP4.59□□□□□ -1.67
PTPRK-220ENST00000531466 TMEM51Q9NW97 253 aa4.59□□□□□ -1.67
PTPRK-220ENST00000531466 NPIPB13A6NJU9 1138 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 NPIPB5A8MRT5 1133 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 HNRNPCL2B2RXH8 293 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 NPIPB4C9JG80 1138 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 EDIL3O43854 480 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 SLC22A3O75751 556 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 HEXIM1O94992 359 aaKnown RBP4.58□□□□□ -1.68
PTPRK-220ENST00000531466 PMS2P2O95744 297 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 PCP4P48539 62 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 ALKBH1Q13686 389 aaKnown RBP4.58□□□□□ -1.68
PTPRK-220ENST00000531466 CALCRLQ16602 461 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 MPEG1Q2M385 716 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 ZNF772Q68DY9 489 aaPredicted RBP4.58□□□□□ -1.68
PTPRK-220ENST00000531466 ACAD9Q9H845 621 aa4.58□□□□□ -1.68
PTPRK-220ENST00000531466 LIN7CQ9NUP9 197 aaKnown RBP4.58□□□□□ -1.68
PTPRK-220ENST00000531466 FAM90A18PA6NE21 464 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 FAM90A16PA6NEW6 464 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 FAM90A9PA6NNJ1 464 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 FAM90A5PA8MXJ8 464 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 AMBPP02760 352 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 FAM90A15PP0C7V4 464 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 FAM90A14PP0C7W9 464 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 LYL1P12980 280 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 FMO4P31512 558 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 HSPA7P48741 367 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 ADORA2A-AS1P86434 159 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 PLA2G4FQ68DD2 849 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 EPHX4Q8IUS5 362 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 ZNF441Q8N8Z8 693 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 STT3BQ8TCJ2 826 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 USP13Q92995 863 aaPredicted RBP4.57□□□□□ -1.68
PTPRK-220ENST00000531466 MTBPQ96DY7 904 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 OR1F2PQ96R84 312 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 CADM1Q9BY67 442 aaKnown RBP4.57□□□□□ -1.68
PTPRK-220ENST00000531466 TP63Q9H3D4 680 aaPredicted RBP4.57□□□□□ -1.68
PTPRK-220ENST00000531466 SLC22A11Q9NSA0 550 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 SLC39A10Q9ULF5 831 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 PHTF1Q9UMS5 762 aa4.57□□□□□ -1.68
PTPRK-220ENST00000531466 ASNA1O43681 348 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 IGHV4-30-4P0DP06 118 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 CLCN3P51790 818 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 TBC1D9BQ66K14 1250 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 KRTAP7-1Q8IUC3 87 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 SCN4BQ8IWT1 228 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 CIARTQ8N365 385 aaPredicted RBP4.56□□□□□ -1.68
PTPRK-220ENST00000531466 DDX23Q9BUQ8 820 aaKnown RBP4.56□□□□□ -1.68
PTPRK-220ENST00000531466 ZNF696Q9H7X3 374 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 LRFN1Q9P244 771 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 UPB1Q9UBR1 384 aa4.56□□□□□ -1.68
PTPRK-220ENST00000531466 TARSL2A2RTX5 802 aaKnown RBP4.55□□□□□ -1.68
PTPRK-220ENST00000531466 CHL1O00533 1208 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 SYN3O14994 580 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 FGF17O60258 216 aa4.55□□□□□ -1.68
PTPRK-220ENST00000531466 DCTDP32321 178 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms