RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 HEMK1Q9Y5R4 338 aaPredicted RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 SNX10Q9Y5X0 201 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 HS3ST4Q9Y661 456 aa9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 ARHGEF17Q96PE2 2063 aaPredicted RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 SPENQ96T58 3664 aaKnown RBP9.42□□□□□ -0.9
CHMP4A-205ENST00000531158 A0A0D9SEW6 157 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 K7ESM1 405 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 KIF2AO00139 706 aaPredicted RBP9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 KLK10O43240 276 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 SPINT1O43278 529 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 SART1O43290 800 aaKnown RBP9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 NRDCO43847 1150 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 MAGEC1O60732 1142 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 PAGE1O75459 146 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 GP1BAP07359 652 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 RRM1P23921 792 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 CHRNA3P32297 505 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 NNMTP40261 264 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 ERVPABLB-1P60509 514 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 MYL5Q02045 173 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 FZD2Q14332 565 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 SYCP1Q15431 976 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 MEA1Q16626 185 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 ISXQ2M1V0 245 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 CT47A1Q5JQC4 288 aaPredicted RBP9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 RABGAP1LQ5R372 815 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 TTC39BQ5VTQ0 682 aaPredicted RBP9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 FAM46CQ5VWP2 391 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 KIAA1614Q5VZ46 1190 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 OLFML1Q6UWY5 402 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 LINGO4Q6UY18 593 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF574Q6ZN55 896 aaPredicted RBP9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 DSG4Q86SJ6 1040 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 TRIM59Q8IWR1 403 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 LRRC8AQ8IWT6 810 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 ATP6V0D2Q8N8Y2 350 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 EHBP1Q8NDI1 1231 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 ATXN7L3BQ96GX2 97 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 CCDC34Q96HJ3 373 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 VCPIP1Q96JH7 1222 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 KLF6Q99612 283 aaPredicted RBP9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 FAM117AQ9C073 453 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 INTS2Q9H0H0 1204 aaKnown RBP9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 OSBPL2Q9H1P3 480 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 POLR1BQ9H9Y6 1135 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 TMPRSS4Q9NRS4 437 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 DDIT4Q9NX09 232 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF212Q9UDV6 495 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 VPS51Q9UID3 782 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 SLC25A13Q9UJS0 675 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 VPS28Q9UK41 221 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 SATB2Q9UPW6 733 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
CHMP4A-205ENST00000531158 SPTAN1Q13813 2472 aaKnown RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 NBASA2RRP1 2371 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 C1QTNF3-AMACRE9PGA6 284 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 KPNA3O00505 521 aaPredicted RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 SCAMP1O15126 338 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 P4HA2O15460 535 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 ERBB2P04626 1255 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 KRT5P13647 590 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 PRKCSHP14314 528 aaPredicted RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 NME1P15531 152 aaKnown RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 HNRNPA2B1P22626 353 aaKnown RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 CCR1P32246 355 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 ACADSBP45954 432 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 CCZ1BP86790 482 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 CCZ1P86791 482 aaPredicted RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 NCAPHQ15003 741 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 CDKN3Q16667 212 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 C3orf38Q5JPI3 329 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 PERM1Q5SV97 790 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 NEK5Q6P3R8 708 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 GUSBP11Q6P575 273 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 Q6ZSR6 202 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 FAM183BPQ6ZVS7 135 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 PASD1Q8IV76 773 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 C17orf53Q8N3J3 647 aaPredicted RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 ZNF548Q8NEK5 533 aaPredicted RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 TMIEQ8NEW7 156 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 IFI44Q8TCB0 444 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 GRIN3AQ8TCU5 1115 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 KCNE4Q8WWG9 221 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 DEPDC7Q96QD5 511 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 TNKS2Q9H2K2 1166 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 PIGVQ9NUD9 493 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 RMND1Q9NWS8 449 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 DNAJC28Q9NX36 388 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 GGT7Q9UJ14 662 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 AJAP1Q9UKB5 411 aaPredicted RBP9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 ENTPD2Q9Y5L3 495 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 ACTL7AQ9Y615 435 aa9.4□□□□□ -0.9
CHMP4A-205ENST00000531158 SDK2Q58EX2 2172 aa9.4□□□□□ -0.91
CHMP4A-205ENST00000531158 UTP20O75691 2785 aaKnown RBP9.4□□□□□ -0.91
CHMP4A-205ENST00000531158 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.39□□□□□ -0.91
CHMP4A-205ENST00000531158 SPTY2D1-AS1A0A0U1RR47 76 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms