RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 HECAQ9UBI9 543 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 IL36AQ9UHA7 158 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 REXO2Q9Y3B8 237 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 MFHAS1Q9Y4C4 1052 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 WASF2Q9Y6W5 498 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 CFAP54Q96N23 3096 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 RCCD1A6NED2 376 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 RNF103O00237 685 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 DFFAO00273 331 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 PLK4O00444 970 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 SLC7A4O43246 635 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 LEFTY1O75610 366 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 IPO7O95373 1038 aaKnown RBP12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 GSRP00390 522 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 KDELR1P24390 212 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 MAOBP27338 520 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 CCNHP51946 323 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 SNRPD1P62314 119 aaKnown RBP12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 CNTN1Q12860 1018 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 MMRN1Q13201 1228 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 SF3A2Q15428 464 aaKnown RBP12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 CYTH1Q15438 398 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 MYLK3Q32MK0 819 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 LRRC38Q5VT99 294 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 MAP7D3Q8IWC1 876 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 TP53INP2Q8IXH6 220 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 RGL4Q8IZJ4 473 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 OR2AP1Q8NGE2 309 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 OR2T34Q8NGX1 318 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 PCDH19Q8TAB3 1148 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 CEP76Q8TAP6 659 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 RAPGEF5Q92565 580 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 ZNF670Q9BS34 389 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 CALN1Q9BXU9 219 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 TM6SF2Q9BZW4 377 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 KLHL11Q9NVR0 708 aa12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 UBA2Q9UBT2 640 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.89□□□□□ -0.35
CCDC90B-216ENST00000529856 LRRC72A6NJI9 287 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 MEI4A8MW99 385 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 PATE3B3GLJ2 98 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 C10orf142B7Z368 130 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 KPNA3O00505 521 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 KHNYNO15037 678 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 BUB1BO60566 1050 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 POP4O95707 220 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 COMTP21964 271 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 ADPRHP54922 357 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 RHOAP61586 193 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 LMNB2Q03252 620 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 IL10RBQ08334 325 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 DUOXA1Q1HG43 343 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 POM121L1PQ3SYA9 428 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 ANKRD20A8PQ5CZ79 823 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 ATXN7L2Q5T6C5 722 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 AGBL4Q5VU57 503 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 NCEH1Q6PIU2 408 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 ARHGAP36Q6ZRI8 547 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 C12orf50Q8NA57 414 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 OR14C36Q8NHC7 312 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 GRIN3AQ8TCU5 1115 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 VOPP1Q96AW1 172 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 ARRDC3Q96B67 414 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 FAF2Q96CS3 445 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 LRIG1Q96JA1 1093 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 HDAC8Q9BY41 377 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 KDM4CQ9H3R0 1056 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 EVLQ9UI08 416 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 IPO11Q9UI26 975 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 SALL4Q9UJQ4 1053 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 HYOU1Q9Y4L1 999 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 PI4KAP42356 2102 aa12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 ATXN2Q99700 1313 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-216ENST00000529856 FAM47DPA6NHR8 397 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 BTNL10A8MVZ5 291 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 PRR5-ARHGAP8B1AHC4 643 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 ZNF487B1APH4 448 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 PJA2O43164 708 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 PLRG1O43660 514 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 FSBPO95073 299 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 IGSF6O95976 241 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 SERPINB6P35237 376 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 GSDMDP57764 484 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 IRX4P78413 519 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 CCDC15Q0P6D6 951 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 RFTN1Q14699 578 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 PAFAH1B3Q15102 231 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 TRIM61Q5EBN2 209 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 PIP5KL1Q5T9C9 394 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 KIAA0895LQ68EN5 471 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 TCEAL6Q6IPX3 200 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 SLC23A3Q6PIS1 610 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 ERN2Q76MJ5 926 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms