RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 FZD4Q9ULV1 537 aa3.71□□□□□ -1.82
AMBRA1-208ENST00000529558 PA2G4Q9UQ80 394 aaKnown RBP3.71□□□□□ -1.82
AMBRA1-208ENST00000529558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.71□□□□□ -1.82
AMBRA1-208ENST00000529558 MAP3K2Q9Y2U5 619 aa3.71□□□□□ -1.82
AMBRA1-208ENST00000529558 CLDN16Q9Y5I7 305 aa3.71□□□□□ -1.82
AMBRA1-208ENST00000529558 CCDC180Q9P1Z9 1646 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 LOC100509620A0A075B734 347 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 TCRBV21S2A2A0A5A6 115 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ARHGAP10A1A4S6 786 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 CCDC151A5D8V7 595 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 OR6C68A6NDL8 312 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 TTC34A8MYJ7 566 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 USP17L23D6RBM5 183 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 MCIDASD6RGH6 385 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 IFNL4K9M1U5 179 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 QSOX1O00391 747 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 PSMD14O00487 310 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SUV39H1O43463 412 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 STRNO43815 780 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 PRICKLE3O43900 615 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 HS6ST1O60243 411 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SYNCRIPO60506 623 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 USP12O75317 370 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 TJP3O95049 919 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ADAP00813 363 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SERPINC1P01008 464 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 RHOP08100 348 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 THEGLP0DJG4 465 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 MED14OSP0DP75 135 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 JUNBP17275 347 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 POU1F1P28069 291 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 CTGFP29279 349 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 TYK2P29597 1187 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 GABRB2P47870 512 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 CAMPP49913 170 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 PNLIPRP2P54317 469 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 PDE1AP54750 535 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SLURP1P55000 103 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 MRPS5P82675 430 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 HHEXQ03014 270 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 AP1B1Q10567 949 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 IKQ13123 557 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 GRAPQ13588 217 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SLMAPQ14BN4 828 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 RNPS1Q15287 305 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ZSCAN23Q3MJ62 389 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 TTC31Q49AM3 519 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ZNF385BQ569K4 471 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 DNAJC21Q5F1R6 531 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SERTAD4-AS1Q5TG53 156 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 PMS2CLQ68D20 193 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 DENND2CQ68D51 928 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ARMC6Q6NXE6 501 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 CAVIN1Q6NZI2 390 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ALKBH5Q6P6C2 394 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SUSD1Q6UWL2 747 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 IL20RBQ6UXL0 311 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 Q6ZRM9 215 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 Q6ZWC4 215 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 MOB3CQ70IA8 216 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SGMS1Q86VZ5 419 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 FAM185AQ8N0U4 392 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 FUKQ8N0W3 1084 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 LGI4Q8N135 537 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 GHDCQ8N2G8 530 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 AMER2Q8N7J2 671 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SCAIQ8N9R8 606 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 DNAAF1Q8NEP3 725 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 KIF18AQ8NI77 898 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 RP9Q8TA86 221 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 FAM110DQ8TAY7 271 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 MYCBPAPQ8TBZ2 947 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 SGCDQ92629 289 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 PTP4A1Q93096 173 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 FUBP1Q96AE4 644 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 LRRC59Q96AG4 307 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 FKBP10Q96AY3 582 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 KAZALD1Q96I82 304 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 CFAP57Q96MR6 1250 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 GPR78Q96P69 363 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 DGAT2Q96PD7 388 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 FYTTD1Q96QD9 318 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 OR2A14Q96R47 310 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 PI4K2AQ9BTU6 479 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 CCDC106Q9BWC9 280 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 CADM1Q9BY67 442 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 RNF26Q9BY78 433 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ARHGEF38Q9NXL2 777 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 NLKQ9UBE8 527 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 DKK3Q9UBP4 350 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 DNAJB9Q9UBS3 223 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 AMACRQ9UHK6 382 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 OSGIN1Q9UJX0 560 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 DTX4Q9Y2E6 619 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 REXO2Q9Y3B8 237 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 OAS3Q9Y6K5 1087 aaKnown RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ADGRA2Q96PE1 1338 aa3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ZNF644Q9H582 1327 aaPredicted RBP3.7□□□□□ -1.82
AMBRA1-208ENST00000529558 ZCCHC6Q5VYS8 1495 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms