RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 LAYNQ6UX15 382 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 DPY19L3Q6ZPD9 716 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 TRIM69Q86WT6 500 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 NAXDQ8IW45 347 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 PLPP6Q8IY26 295 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 CHST14Q8NCH0 376 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 GATA6Q92908 595 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 ZNF653Q96CK0 615 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 PPP1R16AQ96I34 528 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 SERAC1Q96JX3 654 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 SLC6A18Q96N87 628 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 NCAPGQ9BPX3 1015 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 IL21RQ9HBE5 538 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 MRPL47Q9HD33 250 aaKnown RBP13.34□□□□□ -0.27
SSH3-206ENST00000529224 AASDHPPTQ9NRN7 309 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 TM7SF3Q9NS93 570 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 IFNKQ9P0W0 207 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
SSH3-206ENST00000529224 FNDC3AQ9Y2H6 1198 aaKnown RBP13.34□□□□□ -0.27
SSH3-206ENST00000529224 PCDHB9Q9Y5E1 797 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 PCDHGB2Q9Y5G2 931 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 SNX11Q9Y5W9 270 aa13.34□□□□□ -0.27
SSH3-206ENST00000529224 TMEM191CA6NGB0 347 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 WASH4PA8MWX3 477 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 EIF3CLB5ME19 914 aaKnown RBP13.33□□□□□ -0.28
SSH3-206ENST00000529224 FGF10O15520 208 aaPredicted RBP13.33□□□□□ -0.28
SSH3-206ENST00000529224 SH3BP5O60239 455 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 ZNF821O75541 412 aaPredicted RBP13.33□□□□□ -0.28
SSH3-206ENST00000529224 LEFTY1O75610 366 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 SERPING1P05155 500 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 CD38P28907 300 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 CTSKP43235 329 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 YBEYP58557 167 aaPredicted RBP13.33□□□□□ -0.28
SSH3-206ENST00000529224 TPI1P60174 286 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 PPP2CBP62714 309 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 PPP2CAP67775 309 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 SLC45A4Q5BKX6 768 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 CARD16Q5EG05 197 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 PIP5KL1Q5T9C9 394 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 NEK5Q6P3R8 708 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 ZNF354CQ86Y25 554 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 DNAAF5Q86Y56 855 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 GRIN3AQ8TCU5 1115 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 ARRDC3Q96B67 414 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 EIF3CQ99613 913 aaKnown RBP13.33□□□□□ -0.28
SSH3-206ENST00000529224 HEPHQ9BQS7 1158 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSH3-206ENST00000529224 HDAC8Q9BY41 377 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 ISCUQ9H1K1 167 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 EBF2Q9HAK2 575 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 KLK13Q9UKR3 277 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 CAPN11Q9UMQ6 739 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 AP4E1Q9UPM8 1137 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 DMTF1Q9Y222 760 aa13.33□□□□□ -0.28
SSH3-206ENST00000529224 FCF1Q9Y324 198 aaKnown RBP13.33□□□□□ -0.28
SSH3-206ENST00000529224 LUC7L2Q9Y383 392 aaKnown RBP13.33□□□□□ -0.28
SSH3-206ENST00000529224 FREM2Q5SZK8 3169 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 KDELR3O43731 214 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 CD160O95971 181 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 CCT8P50990 548 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 CCNHP51946 323 aaPredicted RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 TAS2R38P59533 333 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 SNRPD1P62314 119 aaKnown RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 SUZ12Q15022 739 aaKnown RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 ZNF423Q2M1K9 1284 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 PARP15Q460N3 678 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 SETMARQ53H47 684 aaPredicted RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 ERMARDQ5T6L9 678 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 HGSNATQ68CP4 663 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 ERN2Q76MJ5 926 aaKnown RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 PSTKQ8IV42 348 aaKnown RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 KDF1Q8NAX2 398 aaPredicted RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 SETD7Q8WTS6 366 aaKnown RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 CPLX3Q8WVH0 158 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 CASKIN2Q8WXE0 1202 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 TM6SF2Q9BZW4 377 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 DHX35Q9H5Z1 703 aaKnown RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 NOL6Q9H6R4 1146 aaKnown RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 MYO1AQ9UBC5 1043 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 HECAQ9UBI9 543 aaPredicted RBP13.32□□□□□ -0.28
SSH3-206ENST00000529224 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.32□□□□□ -0.28
SSH3-206ENST00000529224 ACTL7AQ9Y615 435 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 WASF2Q9Y6W5 498 aa13.32□□□□□ -0.28
SSH3-206ENST00000529224 A0A1W2PR77 199 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 RASA4BC9J798 803 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 H0Y8X5 98 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 FLRT2O43155 660 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 RASA4O43374 803 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 BUB1O43683 1085 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 PRPSAP2O60256 369 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 RNGTTO60942 597 aaKnown RBP13.31□□□□□ -0.28
SSH3-206ENST00000529224 GSRP00390 522 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 WNT1P04628 370 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 GYPCP04921 128 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 ITGB7P26010 798 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 MIPP30301 263 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 MAT2AP31153 395 aaKnown RBP13.31□□□□□ -0.28
SSH3-206ENST00000529224 NEK3P51956 506 aa13.31□□□□□ -0.28
SSH3-206ENST00000529224 ZNF135P52742 658 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms