RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 ZNF575Q86XF7 245 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 VSIG1Q86XK7 387 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 BRSK2Q8IWQ3 736 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 TEX11Q8IYF3 940 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 CHCHD4Q8N4Q1 142 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 PLD5Q8N7P1 536 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 MAFAQ8NHW3 353 aaPredicted RBP3.49□□□□□ -1.85
CD44-229ENST00000528672 RP9Q8TA86 221 aaKnown RBP3.49□□□□□ -1.85
CD44-229ENST00000528672 AKAP1Q92667 903 aaKnown RBP eCLIP3.49□□□□□ -1.85
CD44-229ENST00000528672 INTS12Q96CB8 462 aaKnown RBP3.49□□□□□ -1.85
CD44-229ENST00000528672 CMTM3Q96MX0 182 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 CPNE5Q9HCH3 593 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 SERTAD4Q9NUC0 356 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 MRGBPQ9NV56 204 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 CHORDC1Q9UHD1 332 aaPredicted RBP3.49□□□□□ -1.85
CD44-229ENST00000528672 SLCO3A1Q9UIG8 710 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 ADAMTS5Q9UNA0 930 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 B3GNT3Q9Y2A9 372 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 ZNF711Q9Y462 761 aa3.49□□□□□ -1.85
CD44-229ENST00000528672 A0A1W2PQ09 198 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 TCRBV5S1A1TA0A578 114 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 TRIM64CA6NLI5 447 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 CHL1O00533 1208 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 PES1O00541 588 aaKnown RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 SH2B2O14492 632 aaPredicted RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 DSCR3O14972 297 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 FYB1O15117 783 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 BCAT2O15382 392 aaPredicted RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 CEP104O60308 925 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 HBP1O60381 514 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 HNRNPCP07910 306 aaKnown RBP eCLIP3.48□□□□□ -1.85
CD44-229ENST00000528672 ALDOCP09972 364 aaKnown RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 HOXB9P17482 250 aaPredicted RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 PBX3P40426 434 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 DPP6P42658 865 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 TNNT2P45379 298 aaPredicted RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 MTNR1AP48039 350 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 CCT8P50990 548 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 ZNF132P52740 706 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 OAZ1P54368 228 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 SOX10P56693 466 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 SLC37A1P57057 533 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 EEFSECP57772 596 aaKnown RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 SHC2P98077 582 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 B4GALNT1Q00973 533 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 AIMP2Q13155 320 aaKnown RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 SLC14A1Q13336 389 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 IL13RA2Q14627 380 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 TAF11Q15544 211 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 GSTA3Q16772 222 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 PLAC9Q5JTB6 97 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 GJB7Q6PEY0 223 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 OLFML1Q6UWY5 402 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 CCDC73Q6ZRK6 1079 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 TFAP2DQ7Z6R9 452 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 UBE2Q1Q7Z7E8 422 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 TMEM200AQ86VY9 491 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 LAS2Q8IYD9 372 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 ADGRF2Q8IZF7 708 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 KCTD6Q8NC69 237 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 TMEM116Q8NCL8 245 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 ABHD11Q8NFV4 315 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 IGFBPL1Q8WX77 278 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 HSPH1Q92598 858 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 FAM149B1Q96BN6 582 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 ZG16BQ96DA0 208 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 CDHR1Q96JP9 859 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 SPATA17Q96L03 361 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 SNX18Q96RF0 628 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 SH2D3AQ9BRG2 576 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 THAP7Q9BT49 309 aaPredicted RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 ADGRE3Q9BY15 652 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 RNF26Q9BY78 433 aaPredicted RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 OR10A4Q9H209 315 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 SLC32A1Q9H598 525 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 SH2D4AQ9H788 454 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 PDE7BQ9NP56 450 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 CCDC177Q9NQR7 707 aaPredicted RBP3.48□□□□□ -1.85
CD44-229ENST00000528672 SH3BP4Q9P0V3 963 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 LRIT1Q9P2V4 623 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 MORF4L1Q9UBU8 362 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 SUN2Q9UH99 717 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 INSL6Q9Y581 213 aa3.48□□□□□ -1.85
CD44-229ENST00000528672 C17orf113A0A1B0GUU1 675 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 FRMD3A2A2Y4 597 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 A8MV72 311 aaPredicted RBP3.47□□□□□ -1.85
CD44-229ENST00000528672 EIF3CLB5ME19 914 aaKnown RBP3.47□□□□□ -1.85
CD44-229ENST00000528672 STRNO43815 780 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 PROP1O75360 226 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 TJP3O95049 919 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 HSPA4LO95757 839 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 GALTP07902 379 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 ZNF8P17098 575 aaPredicted RBP3.47□□□□□ -1.85
CD44-229ENST00000528672 SAT1P21673 171 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 MCM3P25205 808 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 FMO4P31512 558 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 TTKP33981 857 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 GJC1P36383 396 aa3.47□□□□□ -1.85
CD44-229ENST00000528672 GARSP41250 739 aaKnown RBP3.47□□□□□ -1.85
CD44-229ENST00000528672 STAT6P42226 847 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms