RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 HDAC8Q9BY41 377 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 THAP2Q9H0W7 228 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 TNKS2Q9H2K2 1166 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 SLC32A1Q9H598 525 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 DHX35Q9H5Z1 703 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 PREBQ9HCU5 417 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 DYRK4Q9NR20 520 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 PCSK1NQ9UHG2 260 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 IP6K2Q9UHH9 426 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 NENFQ9UMX5 172 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 FCF1Q9Y324 198 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 WASF2Q9Y6W5 498 aa12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-209ENST00000528230 A0A1B0GVT2 93 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 SSU72P8A0A1W2PR75 194 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 PLK4O00444 970 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 VILLO15195 856 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 BUB1O43683 1085 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 DFNA5O60443 496 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 LEFTY1O75610 366 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 POP4O95707 220 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 CD59P13987 128 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 DNA2P51530 1060 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 CCNHP51946 323 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 TAS2R38P59533 333 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 SNRPD1P62314 119 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 SERINC3Q13530 473 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 SLC18A3Q16572 532 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 CA9Q16790 459 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 HLA-BQ31612 363 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 PIP5KL1Q5T9C9 394 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 CYP4V2Q6ZWL3 525 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 ERN2Q76MJ5 926 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 RNF214Q8ND24 703 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 ARRDC3Q96B67 414 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 GAREM1Q9H706 876 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 LRRC19Q9H756 370 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 EBF2Q9HAK2 575 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 GPATCH2LQ9NWQ4 482 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 DMTF1Q9Y222 760 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 PCDHGB2Q9Y5G2 931 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 SLCO1B1Q9Y6L6 691 aa12.33□□□□□ -0.44
TRAPPC4-209ENST00000528230 TRPM6Q9BX84 2022 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 MYO1FO00160 1098 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 DAPK3O43293 454 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 RNGTTO60942 597 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 ERCC2P18074 760 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 ITGB7P26010 798 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 CD38P28907 300 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 DPYSL2Q16555 572 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 KIF19Q2TAC6 998 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 ASTE1Q2TB18 679 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 MYLK3Q32MK0 819 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 POM121L1PQ3SYA9 428 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 SLC45A4Q5BKX6 768 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 N4BP2L1Q5TBK1 243 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 SARM1Q6SZW1 724 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 DBX2Q6ZNG2 339 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 RFX8Q6ZV50 586 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 ZNF354CQ86Y25 554 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 LZTR1Q8N653 840 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 OR2AP1Q8NGE2 309 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 OR2I1PQ8NGU4 316 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 TEKT4Q8WW24 435 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 HMCESQ96FZ2 354 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 KCTD15Q96SI1 283 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 NUP85Q9BW27 656 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 OSBPL1AQ9BXW6 950 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 ZWILCHQ9H900 591 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 LCMT1Q9UIC8 334 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 MFHAS1Q9Y4C4 1052 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 ACTL7AQ9Y615 435 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 KNL1Q8NG31 2342 aa12.32□□□□□ -0.44
TRAPPC4-209ENST00000528230 LAMA1P25391 3075 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 A0A1W2PR77 199 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 ARHGAP42A6NI28 874 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 RNF103O00237 685 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 AP1G1O43747 822 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 TMCC1O94876 653 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 H2AFZP0C0S5 128 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 IL1R2P27930 398 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 CTSKP43235 329 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 NEK3P51956 506 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 C21orf59P57076 290 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 PPP2CBP62714 309 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 PPP2CAP67775 309 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 RAD51Q06609 339 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 OVGP1Q12889 678 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 SUZ12Q15022 739 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 ZNF423Q2M1K9 1284 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 SETMARQ53H47 684 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 PPP6R3Q5H9R7 873 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 AFMIDQ63HM1 303 aa12.31□□□□□ -0.44
TRAPPC4-209ENST00000528230 NAPEPLDQ6IQ20 393 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms