RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 TBC1D3IA0A087WXS9 549 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3EA0A087X179 549 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3KA0A087X1G2 549 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 A0A1W2PRV1 198 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RGSL1A5PLK6 1076 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3BA6NDS4 549 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3FA6NER0 549 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 OR6C76A6NM76 312 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3LB9A6J9 549 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 M0QZQ0 153 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 GRM8O00222 908 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 POLRMTO00411 1230 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 DNM1LO00429 736 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 ZNF263O14978 683 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PJA2O43164 708 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PAGE4O60829 102 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 GCNT3O95395 438 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 NUDT3O95989 172 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 POMCP01189 267 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 HMOX1P09601 288 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3HP0C7X1 549 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PRR35P0CG20 571 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 CDK4P11802 303 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 KRT13P13646 458 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 DRD1P21728 446 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 SLC6A2P23975 617 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 HOXA11P31270 313 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 CPOXP36551 454 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PBX1P40424 430 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PIP4K2AP48426 406 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PXNP49023 591 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 NT5C2P49902 561 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TKTL1P51854 596 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PMS2P54278 862 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 NPEPPSP55786 919 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RPL15P61313 204 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 HMGN5P82970 282 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TIAL1Q01085 375 aaKnown RBP eCLIP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 AKAP17AQ02040 695 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RIN1Q13671 783 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 ITGA7Q13683 1181 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TUBB2AQ13885 445 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 BAATQ14032 418 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RCN2Q14257 317 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 ACOX1Q15067 660 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 MEP1BQ16820 701 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 HYAL4Q2M3T9 481 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 KBTBD12Q3ZCT8 623 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 CERCAMQ5T4B2 595 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 FNDC7Q5VTL7 733 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3GQ6DHY5 549 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3CQ6IPX1 549 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 CCDC144NLQ6NUI1 221 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 WDR93Q6P2C0 686 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TMEM81Q6P7N7 255 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 KDELC1Q6UW63 502 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 LAYNQ6UX15 382 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 SERPINA13PQ6UXR4 307 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PARS2Q7L3T8 475 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 ZER1Q7Z7L7 766 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 DSG4Q86SJ6 1040 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RHPN2Q8IUC4 686 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TICAM1Q8IUC6 712 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PEX5LQ8IYB4 626 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TBC1D3Q8IZP1 549 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 SYCP3Q8IZU3 236 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 MINDY1Q8N5J2 469 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 XXYLT1Q8NBI6 393 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 SHCBP1Q8NEM2 672 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 ANKRD20A12PQ8NF67 263 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 CTCFLQ8NI51 663 aaPredicted RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 NPIPB3Q92617 1050 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PRAM1Q96QH2 718 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PAFAH2Q99487 392 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 EIF3CQ99613 913 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 SLX1AQ9BQ83 275 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 TUBB2BQ9BVA1 445 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 CCDC106Q9BWC9 280 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 STRA6Q9BX79 667 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 MRPL1Q9BYD6 325 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 ENKD1Q9H0I2 346 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 C12orf65Q9H3J6 166 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 AGO3Q9H9G7 860 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 FBRSL1Q9HCM7 1045 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 PDE11AQ9HCR9 933 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 KCNK9Q9NPC2 374 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 IL23AQ9NPF7 189 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 MBNL1Q9NR56 388 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 SLC2A4RGQ9NR83 387 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 RRP7BPQ9NSQ0 103 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 FBXO28Q9NVF7 368 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 THAP1Q9NVV9 213 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 LRIT1Q9P2V4 623 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 HSPB7Q9UBY9 170 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 FBXL17Q9UF56 701 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 SEC63Q9UGP8 760 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 HOOK1Q9UJC3 728 aaKnown RBP3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 FBXL5Q9UKA1 691 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 OAZ3Q9UMX2 235 aa3.99□□□□□ -1.77
CLNS1A-208ENST00000527265 NENFQ9UMX5 172 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms