RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 LRCH4O75427 683 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 MAT2AP31153 395 aaKnown RBP17.32■□□□□ 0.36
CCS-203ENST00000526058 GKP32189 559 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 CCNHP51946 323 aaPredicted RBP17.32■□□□□ 0.36
CCS-203ENST00000526058 RACK1P63244 317 aaKnown RBP17.32■□□□□ 0.36
CCS-203ENST00000526058 HMCESQ96FZ2 354 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 HEPHQ9BQS7 1158 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 KDM4CQ9H3R0 1056 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 HECAQ9UBI9 543 aaPredicted RBP17.32■□□□□ 0.36
CCS-203ENST00000526058 FNDC3AQ9Y2H6 1198 aaKnown RBP17.32■□□□□ 0.36
CCS-203ENST00000526058 ACACBO00763 2458 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 FGF10O15520 208 aaPredicted RBP17.31■□□□□ 0.36
CCS-203ENST00000526058 LATO43561 262 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 BUB1O43683 1085 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 CER1O95813 267 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 WNT1P04628 370 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 TCF4P15884 667 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 HNRNPH3P31942 346 aaKnown RBP17.31■□□□□ 0.36
CCS-203ENST00000526058 EIF4A3P38919 411 aaKnown RBP17.31■□□□□ 0.36
CCS-203ENST00000526058 YBEYP58557 167 aaPredicted RBP17.31■□□□□ 0.36
CCS-203ENST00000526058 SLC14A1Q13336 389 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 CCDC122Q5T0U0 273 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 SPECC1LQ69YQ0 1117 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 ALKBH5Q6P6C2 394 aaKnown RBP17.31■□□□□ 0.36
CCS-203ENST00000526058 IL27RAQ6UWB1 636 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 ADAT2Q7Z6V5 191 aaKnown RBP17.31■□□□□ 0.36
CCS-203ENST00000526058 UMODL1-AS1Q8N2C9 162 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 RYBPQ8N488 228 aaPredicted RBP17.31■□□□□ 0.36
CCS-203ENST00000526058 OR6K2Q8NGY2 324 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 VOPP1Q96AW1 172 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 ISG20Q96AZ6 181 aaKnown RBP17.31■□□□□ 0.36
CCS-203ENST00000526058 ARHGEF26Q96DR7 871 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 BTBD6Q96KE9 485 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 CAMK1GQ96NX5 476 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 SLC32A1Q9H598 525 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 ZDHHC6Q9H6R6 413 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 SPEGQ15772 3267 aa17.31■□□□□ 0.36
CCS-203ENST00000526058 SH3BP5O60239 455 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 CYP1A2P05177 515 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 IL1R2P27930 398 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 HTR7P34969 479 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 GEMIN4P57678 1058 aaKnown RBP17.3■□□□□ 0.36
CCS-203ENST00000526058 FAM193AP78312 1265 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 SERINC3Q13530 473 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 PPP6R3Q5H9R7 873 aaPredicted RBP17.3■□□□□ 0.36
CCS-203ENST00000526058 ERN2Q76MJ5 926 aaKnown RBP17.3■□□□□ 0.36
CCS-203ENST00000526058 PRPF39Q86UA1 669 aaKnown RBP17.3■□□□□ 0.36
CCS-203ENST00000526058 TRIM69Q86WT6 500 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 VSTM4Q8IW00 320 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 CELF6Q96J87 481 aaKnown RBP17.3■□□□□ 0.36
CCS-203ENST00000526058 SERAC1Q96JX3 654 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 NUP85Q9BW27 656 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 HDAC8Q9BY41 377 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 DYRK4Q9NR20 520 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 AASDHPPTQ9NRN7 309 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 TM7SF3Q9NS93 570 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 NENFQ9UMX5 172 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 TRPM6Q9BX84 2022 aa17.3■□□□□ 0.36
CCS-203ENST00000526058 SPAARA0A1B0GVQ0 90 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 A0A1W2PR77 199 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 EIF3CLB5ME19 914 aaKnown RBP17.29■□□□□ 0.36
CCS-203ENST00000526058 VILLO15195 856 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 DAPK3O43293 454 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 RNGTTO60942 597 aaKnown RBP17.29■□□□□ 0.36
CCS-203ENST00000526058 TMCC1O94876 653 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 GSRP00390 522 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 CD38P28907 300 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 PCK1P35558 622 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 CTSKP43235 329 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 C21orf59P57076 290 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 SMTNL2Q2TAL5 461 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 PARP15Q460N3 678 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 PRAMEF14Q5SWL7 426 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 ATXN7L2Q5T6C5 722 aaPredicted RBP17.29■□□□□ 0.36
CCS-203ENST00000526058 RFX8Q6ZV50 586 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 PLPP6Q8IY26 295 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 OR2AP1Q8NGE2 309 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 KLK6Q92876 244 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 PPP1R16AQ96I34 528 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 EIF3CQ99613 913 aaKnown RBP17.29■□□□□ 0.36
CCS-203ENST00000526058 DNAJC7Q99615 494 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 SLC39A8Q9C0K1 460 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 LRRC19Q9H756 370 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 PREBQ9HCU5 417 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 CWC15Q9P013 229 aaKnown RBP17.29■□□□□ 0.36
CCS-203ENST00000526058 AKAP13Q12802 2813 aa17.29■□□□□ 0.36
CCS-203ENST00000526058 A0A1W2PQU0 124 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 ZSCAN5CA6NGD5 496 aaPredicted RBP17.28■□□□□ 0.36
CCS-203ENST00000526058 H0Y8X5 98 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 J3KR12 359 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 KRIT1O00522 736 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 ZNF883P0CG24 379 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 ERCC2P18074 760 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 ITGB7P26010 798 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 PMLP29590 882 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 NDST2P52849 883 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 SNRPD1P62314 119 aaKnown RBP17.28■□□□□ 0.36
CCS-203ENST00000526058 CCDC15Q0P6D6 951 aa17.28■□□□□ 0.36
CCS-203ENST00000526058 PIGHQ14442 188 aaPredicted RBP17.28■□□□□ 0.36
CCS-203ENST00000526058 ACAP1Q15027 740 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms