RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 MAFKO60675 156 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 RNASEH1O60930 286 aaKnown RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 ZNF217O75362 1048 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 GJB3O75712 270 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 CNR2P34972 360 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 RECQLP46063 649 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 RGRP47804 291 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 GEMIN4P57678 1058 aaKnown RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 GALNT2Q10471 571 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 ZNF211Q13398 564 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 PLK5Q496M5 336 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 SLC9A4Q6AI14 798 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 ASCL5Q7RTU5 278 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 TMEFF1Q8IYR6 380 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 HDDC3Q8N4P3 179 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 RNF10Q8N5U6 811 aaKnown RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 VOPP1Q96AW1 172 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 ARRDC3Q96B67 414 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 HAUS1Q96CS2 278 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 TOE1Q96GM8 510 aaKnown RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 HEMGNQ9BXL5 484 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 DUSP15Q9H1R2 295 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 FBXL12Q9NXK8 326 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 SAE1Q9UBE0 346 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 EVLQ9UI08 416 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 PPM1HQ9ULR3 514 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 HEY1Q9Y5J3 304 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 WASF2Q9Y6W5 498 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 hCG_1818297A0A087WSY0 165 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 TTC24A2A3L6 582 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 ZNF487B1APH4 448 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 KRIT1O00522 736 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 MUSKO15146 869 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 ALOX15BO15296 676 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 CST8O60676 142 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 LEFTY1O75610 366 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 RNASEH2AO75792 299 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 ZRANB2O95218 330 aaKnown RBP eCLIP13.03□□□□□ -0.324e-17■■□□□ 11.4
VEGFA-224ENST00000523873 PEX11BO96011 259 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 GSRP00390 522 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 PECAM1P16284 738 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 CD6P30203 668 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 ACSL1P33121 698 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 DRD3P35462 400 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 GARSP41250 739 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 PEX5P50542 639 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 SNRPD1P62314 119 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 LBRQ14739 615 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 TAZQ16635 292 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 INO80DQ53TQ3 878 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 METTL3Q86U44 580 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 RCOR2Q8IZ40 523 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 SYCE1Q8N0S2 351 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 TSEN2Q8NCE0 465 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 OR2AP1Q8NGE2 309 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 NKD2Q969F2 451 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 ISG20Q96AZ6 181 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 ZNF419Q96HQ0 510 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 RBM41Q96IZ5 413 aaKnown RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 CCDC114Q96M63 670 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 HEPHQ9BQS7 1158 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 CINPQ9BW66 212 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 GPR174Q9BXC1 333 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 NEUROG2Q9H2A3 272 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 WSB2Q9NYS7 404 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 DTLQ9NZJ0 730 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 IL36AQ9UHA7 158 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
VEGFA-224ENST00000523873 TMEM131Q92545 1883 aa13.03□□□□□ -0.32
VEGFA-224ENST00000523873 CXorf51AA0A1B0GTR3 108 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 PROB1E7EW31 1015 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 C1QTNF3-AMACRE9PGA6 284 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 KPNA3O00505 521 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-224ENST00000523873 PIGNO95427 931 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 IGSF6O95976 241 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 ADH1BP00325 375 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 LMNAP02545 664 aaKnown RBP13.02□□□□□ -0.33
VEGFA-224ENST00000523873 C7P10643 843 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 PYGMP11217 842 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 C5AR1P21730 350 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 DHPSP49366 369 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-224ENST00000523873 RWDD2BP57060 319 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 CNTN1Q12860 1018 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 BYSLQ13895 437 aaKnown RBP13.02□□□□□ -0.33
VEGFA-224ENST00000523873 MYLK3Q32MK0 819 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 TTC31Q49AM3 519 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-224ENST00000523873 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 TMCO4Q5TGY1 634 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 DCAF12L1Q5VU92 463 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 PMS2CLQ68D20 193 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-224ENST00000523873 ZNF662Q6ZS27 426 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 VSIG1Q86XK7 387 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 SLC41A1Q8IVJ1 513 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms