RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 RPS21P63220 83 aaKnown RBP23.21■■□□□ 1.31
PVT1-218ENST00000523328 MAPK8IP2Q13387 824 aaPredicted RBP23.21■■□□□ 1.31
PVT1-218ENST00000523328 CDKN3Q16667 212 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 ARTNQ5T4W7 220 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 KIAA1161Q6NSJ0 714 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 GUSBP11Q6P575 273 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 TRIM65Q6PJ69 517 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 PARGQ86W56 976 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 ZNF397Q8NF99 534 aaPredicted RBP23.21■■□□□ 1.31
PVT1-218ENST00000523328 ATXN7L3BQ96GX2 97 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 PRR11Q96HE9 360 aaPredicted RBP23.21■■□□□ 1.31
PVT1-218ENST00000523328 NPY6RQ99463 290 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.21■■□□□ 1.311e-6■□□□□ 9.2
PVT1-218ENST00000523328 TKTL2Q9H0I9 626 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 ENTPD2Q9Y5L3 495 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 FADS3Q9Y5Q0 445 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 PIEZO2Q9H5I5 2752 aa23.21■■□□□ 1.31
PVT1-218ENST00000523328 GOLGA6L4A6NEF3 574 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 DRGXA6NNA5 263 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 B8ZZF3 427 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 C6P13671 934 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 ADRB3P13945 408 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 CXCR3P49682 368 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 SLC6A3Q01959 620 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 PTPN20Q4JDL3 420 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 BRMS1LQ5PSV4 323 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 TPRG1LQ5T0D9 272 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 ELOA2Q8IYF1 753 aaPredicted RBP23.2■■□□□ 1.3
PVT1-218ENST00000523328 C1orf131Q8NDD1 294 aaKnown RBP23.2■■□□□ 1.3
PVT1-218ENST00000523328 GRAMD1AQ96CP6 724 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 FEM1CQ96JP0 617 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 KLF6Q99612 283 aaPredicted RBP23.2■■□□□ 1.3
PVT1-218ENST00000523328 CRACR2AQ9BSW2 395 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 WDCPQ9H6R7 721 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 MPP6Q9NZW5 540 aa23.2■■□□□ 1.3
PVT1-218ENST00000523328 CPED1A4D0V7 1026 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 EME2A4GXA9 379 aaPredicted RBP23.19■■□□□ 1.3
PVT1-218ENST00000523328 CYSRT1A8MQ03 144 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 H3BM21 787 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 ENDOD1O94919 500 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 ITGB7P26010 798 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 USP8P40818 1118 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 RECQLP46063 649 aaPredicted RBP23.19■■□□□ 1.3
PVT1-218ENST00000523328 RABIFP47224 123 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 STX17P56962 302 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 APBA1Q02410 837 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 ARHGAP44Q17R89 818 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 EFL1Q7Z2Z2 1120 aaKnown RBP23.19■■□□□ 1.3
PVT1-218ENST00000523328 TFAP2DQ7Z6R9 452 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 OR7D4Q8NG98 312 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 SHC3Q92529 594 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 SRRTQ9BXP5 876 aaKnown RBP23.19■■□□□ 1.3
PVT1-218ENST00000523328 NCKIPSDQ9NZQ3 722 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 SALL4Q9UJQ4 1053 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 PCDHGA8Q9Y5G5 932 aa23.19■■□□□ 1.3
PVT1-218ENST00000523328 IGLV3-10A0A075B6K4 115 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 PMS2P1A4D2B8 440 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 CDRT15L2A8MXV6 281 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 K7ENP7 123 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 SPINT1O43278 529 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 AQP9O43315 295 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 AP1G1O43747 822 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 ZMPSTE24O75844 475 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 SLC9A1P19634 815 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 RBMS1P29558 406 aaKnown RBP23.18■■□□□ 1.3
PVT1-218ENST00000523328 L1CAMP32004 1257 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 MORC3Q14149 939 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 DEFB133Q30KQ1 61 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 INO80CQ6PI98 192 aaPredicted RBP23.18■■□□□ 1.3
PVT1-218ENST00000523328 NT5C3BQ969T7 300 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 PGAP3Q96FM1 320 aaPredicted RBP23.18■■□□□ 1.3
PVT1-218ENST00000523328 FAM81BQ96LP2 452 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 TMPRSS4Q9NRS4 437 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 RRN3Q9NYV6 651 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 ZNF212Q9UDV6 495 aa23.18■■□□□ 1.3
PVT1-218ENST00000523328 RIOK3O14730 519 aaKnown RBP23.17■■□□□ 1.3
PVT1-218ENST00000523328 JUNDP17535 347 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 SERPINH1P50454 418 aaKnown RBP23.17■■□□□ 1.3
PVT1-218ENST00000523328 EIF2B5Q13144 721 aaKnown RBP23.17■■□□□ 1.3
PVT1-218ENST00000523328 PDE1CQ14123 709 aaPredicted RBP23.17■■□□□ 1.3
PVT1-218ENST00000523328 PERM1Q5SV97 790 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 CRTC1Q6UUV9 634 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 RBM44Q6ZP01 1051 aaKnown RBP23.17■■□□□ 1.3
PVT1-218ENST00000523328 PARS2Q7L3T8 475 aaKnown RBP23.17■■□□□ 1.3
PVT1-218ENST00000523328 TPCN2Q8NHX9 752 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 C1orf74Q96LT6 269 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 LENG8Q96PV6 779 aaPredicted RBP23.17■■□□□ 1.3
PVT1-218ENST00000523328 HEPHQ9BQS7 1158 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 C1QTNF2Q9BXJ5 285 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 CEP44Q9C0F1 390 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 APEX2Q9UBZ4 518 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 CHD5Q8TDI0 1954 aa23.17■■□□□ 1.3
PVT1-218ENST00000523328 NAV2Q8IVL1 2488 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 ILVBLA1L0T0 632 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 TPP1O14773 563 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 CASC3O15234 703 aaKnown RBP23.16■■□□□ 1.3
PVT1-218ENST00000523328 OR1E1P30953 314 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 SULT1E1P49888 294 aa23.16■■□□□ 1.3
PVT1-218ENST00000523328 CCNHP51946 323 aaPredicted RBP23.16■■□□□ 1.3
PVT1-218ENST00000523328 PAK1Q13153 545 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms