RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 KLC2Q9H0B6 622 aa16.69■□□□□ 0.26
PABPC1-221ENST00000522720 ZWILCHQ9H900 591 aa16.69■□□□□ 0.26
PABPC1-221ENST00000522720 OSGEPQ9NPF4 335 aa16.69■□□□□ 0.26
PABPC1-221ENST00000522720 FSCN3Q9NQT6 498 aa16.69■□□□□ 0.26
PABPC1-221ENST00000522720 CTTNBP2NLQ9P2B4 639 aa16.69■□□□□ 0.26
PABPC1-221ENST00000522720 DOCK9Q9BZ29 2069 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 CABIN1Q9Y6J0 2220 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 KPNA3O00505 521 aaPredicted RBP16.68■□□□□ 0.26
PABPC1-221ENST00000522720 LEFTY1O75610 366 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 MAPK8P45983 427 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 CCR5P51681 352 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 ZNF75DP51815 510 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 CCNHP51946 323 aaPredicted RBP16.68■□□□□ 0.26
PABPC1-221ENST00000522720 ATXN3P54252 364 aaPredicted RBP16.68■□□□□ 0.26
PABPC1-221ENST00000522720 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
PABPC1-221ENST00000522720 CCDC15Q0P6D6 951 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 DPYSQ14117 519 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 SMTNL2Q2TAL5 461 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 AGBL4Q5VU57 503 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 AFMIDQ63HM1 303 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 TXNRD3NBQ6F5E7 133 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 LEKR1Q6ZMV7 388 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 TC2NQ8N9U0 490 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 GRIN3AQ8TCU5 1115 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 ARRDC3Q96B67 414 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 HEPHQ9BQS7 1158 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 TM6SF2Q9BZW4 377 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 ZDHHC5Q9C0B5 715 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.68■□□□□ 0.26
PABPC1-221ENST00000522720 SPTLC3Q9NUV7 552 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 HECAQ9UBI9 543 aaPredicted RBP16.68■□□□□ 0.26
PABPC1-221ENST00000522720 TPX2Q9ULW0 747 aaKnown RBP16.68■□□□□ 0.26
PABPC1-221ENST00000522720 SLCO1B1Q9Y6L6 691 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 WASF2Q9Y6W5 498 aa16.68■□□□□ 0.26
PABPC1-221ENST00000522720 PCNX2A6NKB5 2137 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3DA0A087WVF3 549 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3IA0A087WXS9 549 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3EA0A087X179 549 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3KA0A087X1G2 549 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 A0A1W2PPC4 97 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3FA6NER0 549 aaPredicted RBP16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3LB9A6J9 549 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 H3BRJ5 948 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 RNF103O00237 685 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 PLRG1O43660 514 aaKnown RBP16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TMCC1O94876 653 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 PROSCO94903 275 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 GSRP00390 522 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3HP0C7X1 549 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 ARL4AP40617 200 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 AFF3P51826 1226 aaKnown RBP16.67■□□□□ 0.26
PABPC1-221ENST00000522720 SNRPD1P62314 119 aaKnown RBP16.67■□□□□ 0.26
PABPC1-221ENST00000522720 PIP5KL1Q5T9C9 394 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3GQ6DHY5 549 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3CQ6IPX1 549 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 POLNQ7Z5Q5 900 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 ARHGAP12Q8IWW6 846 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TBC1D3Q8IZP1 549 aaPredicted RBP16.67■□□□□ 0.26
PABPC1-221ENST00000522720 OR2AP1Q8NGE2 309 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 HSPH1Q92598 858 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 MRFAP1L1Q96HT8 127 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 CELF6Q96J87 481 aaKnown RBP16.67■□□□□ 0.26
PABPC1-221ENST00000522720 GTPBP2Q9BX10 602 aaKnown RBP16.67■□□□□ 0.26
PABPC1-221ENST00000522720 HDAC8Q9BY41 377 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 SLC39A8Q9C0K1 460 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 TM9SF3Q9HD45 589 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 DYRK4Q9NR20 520 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 LCMT1Q9UIC8 334 aa16.67■□□□□ 0.26
PABPC1-221ENST00000522720 ARHGAP42A6NI28 874 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 LATO43561 262 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 PRAMEF11O60813 436 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 PLXNA2O75051 1894 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 POP4O95707 220 aaKnown RBP16.66■□□□□ 0.26
PABPC1-221ENST00000522720 PAPOLAP51003 745 aaKnown RBP16.66■□□□□ 0.26
PABPC1-221ENST00000522720 TAS2R38P59533 333 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 GRIK2Q13002 908 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 HADHQ16836 314 aaKnown RBP16.66■□□□□ 0.26
PABPC1-221ENST00000522720 MYLK3Q32MK0 819 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 ERN2Q76MJ5 926 aaKnown RBP16.66■□□□□ 0.26
PABPC1-221ENST00000522720 MINDY1Q8N5J2 469 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 LZTR1Q8N653 840 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 PPP1R16AQ96I34 528 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 LRIG1Q96JA1 1093 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 CSPG4P5Q96PW8 444 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 EBF2Q9HAK2 575 aa16.66■□□□□ 0.26
PABPC1-221ENST00000522720 J3KR12 359 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 AMPD1P23109 780 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 ITGB7P26010 798 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 SSR1P43307 286 aaKnown RBP16.65■□□□□ 0.26
PABPC1-221ENST00000522720 GRIA4P48058 902 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 CSNK1EP49674 416 aaKnown RBP16.65■□□□□ 0.26
PABPC1-221ENST00000522720 PPP2CBP62714 309 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 RACK1P63244 317 aaKnown RBP16.65■□□□□ 0.26
PABPC1-221ENST00000522720 PPP2CAP67775 309 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 CYTH1Q15438 398 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 TEAD4Q15561 434 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 UAP1L1Q3KQV9 507 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 NEK5Q6P3R8 708 aa16.65■□□□□ 0.26
PABPC1-221ENST00000522720 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
PABPC1-221ENST00000522720 NPWQ8N729 165 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms