RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CFAP58Q5T655 872 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 GRAMD4Q6IC98 578 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 CACUL1Q86Y37 369 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ZNF567Q8N184 647 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 SH2D3CQ8N5H7 860 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 TERB1Q8NA31 727 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ACOX2Q99424 681 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ACE2Q9BYF1 805 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 POLR3BQ9NW08 1133 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 CCDC188H7C350 402 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 STK25O00506 426 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 MUSKO15146 869 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 NCAM2O15394 837 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 KDELR3O43731 214 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 PRAMEF11O60813 436 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ECEL1O95672 775 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 SRFP11831 508 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 PTPN3P26045 913 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ECHS1P30084 290 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 TIE1P35590 1138 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ECT2LQ008S8 904 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 OLIG2Q13516 323 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 SLC44A4Q53GD3 710 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ATXN7L2Q5T6C5 722 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 MARC1Q5VT66 337 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 TPRG1Q6ZUI0 275 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 CDKL3Q8IVW4 592 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 AHI1Q8N157 1196 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ALLCQ8N6M5 410 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 CNTD1Q8N815 330 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 NKD2Q969F2 451 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 LMLNQ96KR4 655 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 P2RY13Q9BPV8 354 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 PIH1D1Q9NWS0 290 aaKnown RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 UBA2Q9UBT2 640 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-219ENST00000522387 ASIC3Q9UHC3 531 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 FBXL21Q9UKT6 434 aa12.59□□□□□ -0.39
PABPC1-219ENST00000522387 CHD5Q8TDI0 1954 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 A6NNZ2 444 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 MATN3O15232 486 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 ZMPSTE24O75844 475 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 PEX11BO96011 259 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 MT-CYBP00156 380 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-219ENST00000522387 ITGAVP06756 1048 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 CCNCP24863 283 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 LBRQ14739 615 aaKnown RBP12.58□□□□□ -0.4
PABPC1-219ENST00000522387 TUBB8Q3ZCM7 444 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 KCTD16Q68DU8 428 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 JAMLQ86YT9 394 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 PGBD5Q8N414 524 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 ATXN2LQ8WWM7 1075 aaKnown RBP12.58□□□□□ -0.4
PABPC1-219ENST00000522387 EZH1Q92800 747 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-219ENST00000522387 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 ELOVL2Q9NXB9 296 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 CACNA2D2Q9NY47 1150 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 FBXO10Q9UK96 956 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 PLA2G4CQ9UP65 541 aa12.58□□□□□ -0.4
PABPC1-219ENST00000522387 BCLAF3A2AJT9 711 aaKnown RBP12.57□□□□□ -0.4
PABPC1-219ENST00000522387 TTC34A8MYJ7 566 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 TMCC1O94876 653 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 EGFP01133 1207 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 HLA-DQB2P05538 268 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 RGRP47804 291 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 LIG3P49916 1009 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 ATP1A2P50993 1020 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 SCNN1BP51168 640 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 BASP1P80723 227 aaKnown RBP12.57□□□□□ -0.4
PABPC1-219ENST00000522387 GPS1Q13098 491 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 XRCC4Q13426 336 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 ZNF235Q14590 738 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 POM121L1PQ3SYA9 428 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 ANKRD20A2Q5SQ80 823 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 ANKRD20A1Q5TYW2 823 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 ANKRD20A3Q5VUR7 823 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 ICE2Q659A1 982 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 GJD3Q8N144 294 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 RYBPQ8N488 228 aaPredicted RBP12.57□□□□□ -0.4
PABPC1-219ENST00000522387 C12orf50Q8NA57 414 aaPredicted RBP12.57□□□□□ -0.4
PABPC1-219ENST00000522387 DCAF4L2Q8NA75 395 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 PDFQ9HBH1 243 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 METTL18O95568 372 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 ADCY8P40145 1251 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 MMP13P45452 471 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 FNTAP49354 379 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 IL10RBQ08334 325 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 TEX44Q53QW1 395 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 DGKKQ5KSL6 1271 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 EGFLAMQ63HQ2 1017 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 RNF43Q68DV7 783 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 RETSATQ6NUM9 610 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 Q6ZVU0 165 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 IQCKQ8N0W5 287 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 SIX5Q8N196 739 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 OR2W6PQ8NHA6 318 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 NSMCE1Q8WV22 266 aa12.57□□□□□ -0.4
PABPC1-219ENST00000522387 RBM15Q96T37 977 aaKnown RBP eCLIP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms