RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 A0A1B0GTW7 788 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 SMAD6O43541 496 aaKnown RBP9.62□□□□□ -0.87
CLK4-209ENST00000521621 IPO7O95373 1038 aaKnown RBP9.62□□□□□ -0.87
CLK4-209ENST00000521621 IGSF6O95976 241 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 CTSLP07711 333 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 TCF4P15884 667 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 CCNCP24863 283 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 RECQLP46063 649 aaPredicted RBP9.62□□□□□ -0.87
CLK4-209ENST00000521621 PAPOLAP51003 745 aaKnown RBP9.62□□□□□ -0.87
CLK4-209ENST00000521621 TAS2R40P59535 323 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 PIP5KL1Q5T9C9 394 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 TIGD7Q6NT04 549 aaPredicted RBP9.62□□□□□ -0.87
CLK4-209ENST00000521621 LENG8Q96PV6 779 aaPredicted RBP9.62□□□□□ -0.87
CLK4-209ENST00000521621 RTKNQ9BST9 563 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 GPATCH2LQ9NWQ4 482 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 FBXL12Q9NXK8 326 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 DLL3Q9NYJ7 618 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 SLC6A14Q9UN76 642 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.62□□□□□ -0.87
CLK4-209ENST00000521621 REXO2Q9Y3B8 237 aaKnown RBP9.62□□□□□ -0.87
CLK4-209ENST00000521621 NUP205Q92621 2012 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 MID1O15344 667 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 DAPK3O43293 454 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 DFNA5O60443 496 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 MAFKO60675 156 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 TMCC1O94876 653 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 GNSP15586 552 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 MX2P20592 715 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 GLDCP23378 1020 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 NR2C2P49116 596 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 ADPRHP54922 357 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 AP1S1P61966 158 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 RAD51Q06609 339 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 OVGP1Q12889 678 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 PPP2R5EQ16537 467 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 ZNF805Q5CZA5 627 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 TXNRD3NBQ6F5E7 133 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 KIAA1161Q6NSJ0 714 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 IL27RAQ6UWB1 636 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 Q6ZVU0 165 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 NPWQ8N729 165 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 ECHDC3Q96DC8 303 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 BTBD6Q96KE9 485 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 RNF157Q96PX1 679 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 SPON2Q9BUD6 331 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 ARRDC1-AS1Q9H2J1 176 aa9.62□□□□□ -0.87
CLK4-209ENST00000521621 SLC30A4O14863 429 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 KHNYNO15037 678 aaKnown RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 BUB1O43683 1085 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 IGHV4-34P06331 123 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 GRIA4P48058 902 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 SLC14A1Q13336 389 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 HNRNPDQ14103 355 aaKnown RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 KRT81Q14533 505 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 DCAF12L1Q5VU92 463 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 NCBP2-AS2Q69YL0 99 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 RAD9BQ6WBX8 426 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 DPY19L3Q6ZPD9 716 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 ERN2Q76MJ5 926 aaKnown RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 MMAAQ8IVH4 418 aaKnown RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 TPCN2Q8NHX9 752 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 PCDH19Q8TAB3 1148 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 HDAC11Q96DB2 347 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 OMDQ99983 421 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 SLC6A17Q9H1V8 727 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 NEUROG2Q9H2A3 272 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 DNAAF2Q9NVR5 837 aaKnown RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 SEPT3Q9UH03 358 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 THADAQ6YHU6 1953 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 A0A1W2PPC4 97 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 TSPAN6O43657 245 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 SOCS5O75159 536 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 CR2P20023 1033 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 COL5A1P20908 1838 aaPredicted RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 CTNNA1P35221 906 aaKnown RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 CCNHP51946 323 aaPredicted RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 NEK3P51956 506 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 BZW1Q7L1Q6 419 aaKnown RBP9.61□□□□□ -0.87
CLK4-209ENST00000521621 RCOR2Q8IZ40 523 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 HDDC3Q8N4P3 179 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 PQLC3Q8N755 202 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 KCTD6Q8NC69 237 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 EXD1Q8NHP7 514 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 RLN3Q8WXF3 142 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 HSPH1Q92598 858 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 MGME1Q9BQP7 344 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 TSGA10Q9BZW7 698 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 ERVMER34-1Q9H9K5 563 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 SARDHQ9UL12 918 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 PPIL1Q9Y3C6 166 aa9.61□□□□□ -0.87
CLK4-209ENST00000521621 SOWAHDA6NJG2 315 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 K7ERQ8 282 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 TM4SF5O14894 197 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 ARHGAP6O43182 974 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 SYPP08247 313 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 PSMD8P48556 350 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 DHPSP49366 369 aaPredicted RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 ACCSLQ4AC99 568 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms