RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 POLMQ9NP87 494 aaPredicted RBP15.59■□□□□ 0.09
LSM1-203ENST00000520755 A0A1W2PQF6 199 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 TCRBV21S2A2A0A5A6 115 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 CCDC188H7C350 402 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 K7ERQ8 282 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 KCNK1O00180 336 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 SMAD6O43541 496 aaKnown RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 GALR2O43603 387 aaPredicted RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 ITGAVP06756 1048 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 SRCP12931 536 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 CCNCP24863 283 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 COILP38432 576 aaPredicted RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 SERPINH1P50454 418 aaKnown RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 DGKEP52429 567 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 IFI35P80217 286 aaPredicted RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 CSTF1Q05048 431 aaKnown RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 ZNF33AQ06730 810 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 AP1B1Q10567 949 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 WASHC5Q12768 1159 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 BZW1Q7L1Q6 419 aaKnown RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 LRRC49Q8IUZ0 686 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 MAML2Q8IZL2 1156 aaPredicted RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 KDM1BQ8NB78 822 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 CCNYQ8ND76 341 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 TSTD1Q8NFU3 115 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 FATE1Q969F0 183 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 CARD6Q9BX69 1037 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 CEP41Q9BYV8 373 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 BRD8Q9H0E9 1235 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 PRMT8Q9NR22 394 aaPredicted RBP15.58■□□□□ 0.08
LSM1-203ENST00000520755 SUN2Q9UH99 717 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 HS3ST2Q9Y278 367 aa15.58■□□□□ 0.08
LSM1-203ENST00000520755 EML5Q05BV3 1969 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 ZSCAN5CA6NGD5 496 aaPredicted RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 K7ESF4 209 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 MATN3O15232 486 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 ATP9BO43861 1147 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 BNIP3LO60238 219 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 PTPN3P26045 913 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 CHRNA3P32297 505 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 PXNP49023 591 aaPredicted RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 FNTAP49354 379 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 NUBP1P53384 320 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 GEMIN4P57678 1058 aaKnown RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 SLC10A7Q0GE19 358 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 ANGPT1Q15389 498 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 DLG2Q15700 870 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 HNRNPA1L2Q32P51 320 aaKnown RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 HEATR6Q6AI08 1181 aaKnown RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 ANO7Q6IWH7 933 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 DARS2Q6PI48 645 aaKnown RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 CCDC137Q6PK04 289 aaKnown RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 Q6ZVU0 165 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 PRUNE1Q86TP1 453 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 NOA1Q8NC60 698 aaKnown RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 HMGB4Q8WW32 186 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 HTR3CQ8WXA8 447 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 RTP4Q96DX8 246 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 IL12RB2Q99665 862 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 HOMER3Q9NSC5 361 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 BCCIPQ9P287 314 aaKnown RBP eCLIP15.57■□□□□ 0.08
LSM1-203ENST00000520755 UBA2Q9UBT2 640 aaPredicted RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 PCYOX1Q9UHG3 505 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 FCF1Q9Y324 198 aaKnown RBP15.57■□□□□ 0.08
LSM1-203ENST00000520755 NEU2Q9Y3R4 380 aa15.57■□□□□ 0.08
LSM1-203ENST00000520755 EDDM13A0A1B0GTR0 161 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 RNF103O00237 685 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 MUSKO15146 869 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 KCNN4O15554 427 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 ZBTB24O43167 697 aaPredicted RBP15.56■□□□□ 0.08
LSM1-203ENST00000520755 SIN3BO75182 1162 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 ALDH1A2O94788 518 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 TMCC1O94876 653 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 PAPSS2O95340 614 aaPredicted RBP15.56■□□□□ 0.08
LSM1-203ENST00000520755 APBB3O95704 486 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 HLA-DQB2P05538 268 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 PTGIRP43119 386 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 VASPP50552 380 aaPredicted RBP15.56■□□□□ 0.08
LSM1-203ENST00000520755 SLC20A2Q08357 652 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 TMCO4Q5TGY1 634 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 TIGD7Q6NT04 549 aaPredicted RBP15.56■□□□□ 0.08
LSM1-203ENST00000520755 C22orf39Q6P5X5 142 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 CACUL1Q86Y37 369 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 PGBD3Q8N328 593 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 PGBD5Q8N414 524 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 CAMKK1Q8N5S9 505 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 TEX26Q8N6G2 289 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 CNTD1Q8N815 330 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 FAM71DQ8N9W8 422 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 FRS2Q8WU20 508 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 SLCO2A1Q92959 643 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 CCDC114Q96M63 670 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 ZNF599Q96NL3 588 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 KRT12Q99456 494 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 SLC6A17Q9H1V8 727 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 TNKS2Q9H2K2 1166 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 PRSS16Q9NQE7 514 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 LHX3Q9UBR4 397 aa15.56■□□□□ 0.08
LSM1-203ENST00000520755 FBXO4Q9UKT5 387 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms