RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 PRPF31Q8WWY3 499 aaKnown RBP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 CELF1Q92879 486 aaKnown RBP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 ZKSCAN4Q969J2 545 aaPredicted RBP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 PABPC5Q96DU9 382 aaKnown RBP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 FIZ1Q96SL8 496 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 MACROD1Q9BQ69 325 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 CXorf56Q9H5V9 222 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 RETREG1Q9H6L5 497 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 ERVMER34-1Q9H9K5 563 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 RRP7BPQ9NSQ0 103 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 ABCF3Q9NUQ8 709 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 ARGLU1Q9NWB6 273 aaPredicted RBP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 TAB2Q9NYJ8 693 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 ANKFY1Q9P2R3 1169 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 CTNNAL1Q9UBT7 734 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 TESQ9UGI8 421 aaKnown RBP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 HAO1Q9UJM8 370 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 ICKQ9UPZ9 632 aa4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 REXO2Q9Y3B8 237 aaKnown RBP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 HEMK1Q9Y5R4 338 aaPredicted RBP4.49□□□□□ -1.69
RNU6-488P-201ENST00000515918 FLT1P17948 1338 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 ARHGAP10A1A4S6 786 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 CBY3A6NI87 242 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 PI4K2BG5E9Z4 385 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 ADAMDEC1O15204 470 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 SLC7A4O43246 635 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 PAPSS1O43252 624 aaPredicted RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 TBCAO75347 108 aaKnown RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 PSMD10O75832 226 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 MT-CO3P00414 261 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 NPSP0C0P6 89 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 IFNAR1P17181 557 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 EEFSECP57772 596 aaKnown RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 RUNX2Q13950 521 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 FGFBP1Q14512 234 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 ZNF628Q5EBL2 1059 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 TCP11X2Q5H9J9 407 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 PLAC9Q5JTB6 97 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 OGFOD2Q6N063 350 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 ANKRD16Q6P6B7 361 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 DCLRE1AQ6PJP8 1040 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 ZNF474Q6S9Z5 364 aaPredicted RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 IL20RBQ6UXL0 311 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 GLDNQ6ZMI3 551 aaPredicted RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 TICAM1Q8IUC6 712 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 OR8H3Q8N146 312 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 TMEM217Q8N7C4 229 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 SYT2Q8N9I0 419 aaPredicted RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 IL17DQ8TAD2 202 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 VPS33AQ96AX1 596 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 SAT2Q96F10 170 aaPredicted RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 HS6ST2Q96MM7 605 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 GPATCH1Q9BRR8 931 aaKnown RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 CIPCQ9C0C6 399 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 DEF6Q9H4E7 631 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 ST6GALNAC4Q9H4F1 302 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 PLEKHA4Q9H4M7 779 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 PDZD7Q9H5P4 517 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 OPA3Q9H6K4 179 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 SLC35C2Q9NQQ7 365 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 ASAH2Q9NR71 780 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 SLC6A13Q9NSD5 602 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 PLK2Q9NYY3 685 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 SEC63Q9UGP8 760 aaKnown RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 MTMR6Q9Y217 621 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 TRPV2Q9Y5S1 764 aa4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 SIRT4Q9Y6E7 314 aaPredicted RBP4.48□□□□□ -1.69
RNU6-488P-201ENST00000515918 SPATA31A5Q5VU36 1347 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 SPATA31A6Q5VVP1 1343 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 SPATA31A7Q8IWB4 1347 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 hCG_1809904A0A1W2PP81 198 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 A0A1W2PPE2 198 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 A0A1W2PR64 198 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 PIPSLA2A3N6 862 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 URADA6NGE7 173 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 OTOL1A6NHN0 477 aaPredicted RBP4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 KCNJ18B7U540 433 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 NPIPB11E5RHQ5 1161 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 IPO7O95373 1038 aaKnown RBP4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 TGDSO95455 350 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 C22orf31O95567 290 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 DDAH2O95865 285 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 ENO1P06733 434 aaKnown RBP4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 EEF1DP29692 281 aaKnown RBP4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 HOXC13P31276 330 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 THPOP40225 353 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 ARSFP54793 590 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 MFAP4P55083 255 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 F2RL1P55085 397 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 CYP4F2P78329 520 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 PLIN5Q00G26 463 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 TFCP2Q12800 502 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 SLC14A1Q13336 389 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 ASIC2Q16515 512 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 ME3Q16798 604 aa4.47□□□□□ -1.69
RNU6-488P-201ENST00000515918 COL28A1Q2UY09 1125 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms