RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 CA14Q9ULX7 337 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 SLC8A2Q9UPR5 921 aa12.18□□□□□ -0.46
PDLIM5-220ENST00000514830 TARSL2A2RTX5 802 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 CTAGE15A4D2H0 777 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 WASH3PC4AMC7 463 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 KCNK1O00180 336 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ALOX15BO15296 676 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 KCNN4O15554 427 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 SMAD6O43541 496 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 GAS8O95995 478 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 JCHAINP01591 159 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 CTAGE8P0CG41 777 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 PTGIRP43119 386 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 MAPK8P45983 427 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 RPS9P46781 194 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 STK19P49842 368 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ZBTB17Q13105 803 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 SNX1Q13596 522 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 DLG2Q15700 870 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 HNRNPA1L2Q32P51 320 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ANKRD20A1Q5TYW2 823 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 C22orf39Q6P5X5 142 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 LINGO4Q6UY18 593 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 CTAGE6Q86UF2 777 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 CTAGE4Q8IX94 777 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 CCDC105Q8IYK2 499 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF567Q8N184 647 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 SIX5Q8N196 739 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 MMGT1Q8N4V1 131 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 CCDC33Q8N5R6 958 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF513Q8N8E2 541 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ATP11CQ8NB49 1132 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 SORCS1Q8WY21 1168 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 RPL10LQ96L21 214 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 CINPQ9BW66 212 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 FBRSQ9HAH7 460 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 PCDH9Q9HC56 1237 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 RBM22Q9NW64 420 aaKnown RBP eCLIP12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 SUN2Q9UH99 717 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 SLCO3A1Q9UIG8 710 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 TECTAO75443 2155 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 ATG2BQ96BY7 2078 aa12.17□□□□□ -0.46
PDLIM5-220ENST00000514830 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 EDDM13A0A1B0GTR0 161 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 K7ERQ8 282 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 ECEL1O95672 775 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 HLA-DQB2P05538 268 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 TARSP26639 723 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 NTSR1P30989 418 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 MAGEA9P43362 315 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 KCNJ1P48048 391 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 GDF10P55107 478 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 SNRPD1P62314 119 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 TUBB4BP68371 445 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 CAMK2GQ13555 558 aaPredicted RBP12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF235Q14590 738 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 GRM3Q14832 879 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 EGFLAMQ63HQ2 1017 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 ITPRIPL1Q6GPH6 555 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 MAMSTRQ6ZN01 415 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 MAATS1Q7Z4T9 603 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 PGBD5Q8N414 524 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 FAM71DQ8N9W8 422 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 IL17RCQ8NAC3 791 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 PJA1Q8NG27 643 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 OR2AP1Q8NGE2 309 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 CCHCR1Q8TD31 782 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 CYB5D2Q8WUJ1 264 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 PTPRN2Q92932 1015 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 TADA1Q96BN2 335 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 LRIG1Q96JA1 1093 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 GDAP1L1Q96MZ0 367 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 FCRL5Q96RD9 977 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 NUDCD1Q96RS6 583 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 CPEB1Q9BZB8 566 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 POLR1EQ9GZS1 481 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 SLC25A51Q9H1U9 297 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 TBC1D17Q9HA65 648 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 PAK5Q9P286 719 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 STON1Q9Y6Q2 735 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 ZNF318Q5VUA4 2279 aa12.16□□□□□ -0.46
PDLIM5-220ENST00000514830 FAM187AA6NFU0 413 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 TMEM221A6NGB7 291 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 M0R296 226 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 SGK1O00141 431 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 MUSKO15146 869 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 IGSF6O95976 241 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 CD72P21854 359 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 CD68P34810 354 aaPredicted RBP12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 ACTN2P35609 894 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 IL12RB1P42701 662 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 RHOAP61586 193 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 AP1S1P61966 158 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 FOXK2Q01167 660 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 DR1Q01658 176 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 PTK6Q13882 451 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 PARP6Q2NL67 630 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms