RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 HSPH1Q92598 858 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 ARRDC3Q96B67 414 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 CELF6Q96J87 481 aaKnown RBP18.07■□□□□ 0.48
DDR1-272ENST00000513243 CCDC42Q96M95 316 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 HEPHQ9BQS7 1158 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 SLC39A8Q9C0K1 460 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 EBF2Q9HAK2 575 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 SPTLC3Q9NUV7 552 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 UVRAGQ9P2Y5 699 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 PCDH15Q96QU1 1955 aa18.07■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3DA0A087WVF3 549 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3IA0A087WXS9 549 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3EA0A087X179 549 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3KA0A087X1G2 549 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3FA6NER0 549 aaPredicted RBP18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3LB9A6J9 549 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 PLRG1O43660 514 aaKnown RBP18.06■□□□□ 0.48
DDR1-272ENST00000513243 TMCC1O94876 653 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 SYPP08247 313 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TMEM253P0C7T8 217 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3HP0C7X1 549 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 CCR5P51681 352 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 ZNF75DP51815 510 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 ZNF135P52742 658 aaPredicted RBP18.06■□□□□ 0.48
DDR1-272ENST00000513243 ATXN3P54252 364 aaPredicted RBP18.06■□□□□ 0.48
DDR1-272ENST00000513243 TAS2R38P59533 333 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 SLC25A11Q02978 314 aaKnown RBP18.06■□□□□ 0.48
DDR1-272ENST00000513243 DPYSQ14117 519 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 UAP1L1Q3KQV9 507 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 PIP5KL1Q5T9C9 394 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 AFMIDQ63HM1 303 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3GQ6DHY5 549 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3CQ6IPX1 549 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 CPNE8Q86YQ8 564 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TBC1D3Q8IZP1 549 aaPredicted RBP18.06■□□□□ 0.48
DDR1-272ENST00000513243 TC2NQ8N9U0 490 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 NETO2Q8NC67 525 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TEKT4Q8WW24 435 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 KDM4CQ9H3R0 1056 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 TM9SF3Q9HD45 589 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 OSGEPQ9NPF4 335 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.06■□□□□ 0.48
DDR1-272ENST00000513243 HECAQ9UBI9 543 aaPredicted RBP18.06■□□□□ 0.48
DDR1-272ENST00000513243 ADAMTS9Q9P2N4 1935 aa18.06■□□□□ 0.48
DDR1-272ENST00000513243 A0A1W2PPC4 97 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 H3BRJ5 948 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 GKP32189 559 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 CSNK1EP49674 416 aaKnown RBP18.05■□□□□ 0.48
DDR1-272ENST00000513243 PAPOLAP51003 745 aaKnown RBP18.05■□□□□ 0.48
DDR1-272ENST00000513243 AFF3P51826 1226 aaKnown RBP18.05■□□□□ 0.48
DDR1-272ENST00000513243 PPP2CBP62714 309 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 PPP2CAP67775 309 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 BNC1Q01954 994 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 GRIK2Q13002 908 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 INO80DQ53TQ3 878 aaPredicted RBP18.05■□□□□ 0.48
DDR1-272ENST00000513243 POLNQ7Z5Q5 900 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 ARHGAP12Q8IWW6 846 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 RYBPQ8N488 228 aaPredicted RBP18.05■□□□□ 0.48
DDR1-272ENST00000513243 MINDY1Q8N5J2 469 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 NPWQ8N729 165 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 OR2AP1Q8NGE2 309 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 OR6K2Q8NGY2 324 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 CASKIN2Q8WXE0 1202 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 VOPP1Q96AW1 172 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 PDFQ9HBH1 243 aa18.05■□□□□ 0.48
DDR1-272ENST00000513243 A0A1B0GVT2 93 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 J3KR12 359 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 LATO43561 262 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 PROSCO94903 275 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 GSRP00390 522 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 AMPD1P23109 780 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 ARL4AP40617 200 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 SSR1P43307 286 aaKnown RBP18.04■□□□□ 0.48
DDR1-272ENST00000513243 SNRPD1P62314 119 aaKnown RBP18.04■□□□□ 0.48
DDR1-272ENST00000513243 CYTH1Q15438 398 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 MYLK3Q32MK0 819 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 ATXN7L2Q5T6C5 722 aaPredicted RBP18.04■□□□□ 0.48
DDR1-272ENST00000513243 ERN2Q76MJ5 926 aaKnown RBP18.04■□□□□ 0.48
DDR1-272ENST00000513243 CSPG4P5Q96PW8 444 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 HDAC8Q9BY41 377 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 ZDHHC5Q9C0B5 715 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 ZDHHC6Q9H6R6 413 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 PCDH18Q9HCL0 1135 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 DYRK4Q9NR20 520 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 MFHAS1Q9Y4C4 1052 aa18.04■□□□□ 0.48
DDR1-272ENST00000513243 ARHGAP42A6NI28 874 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 KRIT1O00522 736 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 PRAMEF11O60813 436 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 POP4O95707 220 aaKnown RBP18.03■□□□□ 0.48
DDR1-272ENST00000513243 ITGB7P26010 798 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 CCDC15Q0P6D6 951 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 HADHQ16836 314 aaKnown RBP18.03■□□□□ 0.48
DDR1-272ENST00000513243 LAYNQ6UX15 382 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 TP53INP2Q8IXH6 220 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 SLC35G2Q8TBE7 412 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 TSC1Q92574 1164 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 MRFAP1L1Q96HT8 127 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 PPP1R16AQ96I34 528 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 SLC6A18Q96N87 628 aa18.03■□□□□ 0.48
DDR1-272ENST00000513243 ETNK2Q9NVF9 386 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms