RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 ATP8A2Q9NTI2 1148 aa5.71□□□□□ -1.5
CHD1-209ENST00000512844 PLK2Q9NYY3 685 aa5.71□□□□□ -1.5
CHD1-209ENST00000512844 CNOT7Q9UIV1 285 aaKnown RBP5.71□□□□□ -1.5
CHD1-209ENST00000512844 PLEKHD1A6NEE1 506 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 FAM90A8PA6NJQ4 464 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 OR6C75A6NL08 312 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 LIASO43766 372 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 NTN1O95631 604 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 FGF2P09038 288 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 FAM90A13PP0C7W8 464 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 FAM90A24PP0C7X0 464 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 T-ENOLP0DO92 83 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 HOXB2P14652 356 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 XBP1P17861 261 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 PSMC2P35998 433 aaKnown RBP5.7□□□□□ -1.5
CHD1-209ENST00000512844 MLH1P40692 756 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 CDKN2AP42771 156 aaKnown RBP5.7□□□□□ -1.5
CHD1-209ENST00000512844 RFX2P48378 723 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 PPP3CCP48454 512 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 SELENOVP59797 346 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 CHRNDQ07001 517 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 SLC18A3Q16572 532 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 NFIL3Q16649 462 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 WDR45BQ5MNZ6 344 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 C9orf47Q6ZRZ4 202 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 LRRC8DQ7L1W4 858 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.7□□□□□ -1.5
CHD1-209ENST00000512844 GLCCI1Q86VQ1 547 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 FBXL14Q8N1E6 418 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 TNIP2Q8NFZ5 429 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 RASSF8Q8NHQ8 419 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 THOC3Q96J01 351 aaKnown RBP5.7□□□□□ -1.5
CHD1-209ENST00000512844 NTPCRQ9BSD7 190 aaKnown RBP5.7□□□□□ -1.5
CHD1-209ENST00000512844 CXorf56Q9H5V9 222 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 PLAC1Q9HBJ0 212 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 MYO6Q9UM54 1294 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 INSL5Q9Y5Q6 135 aa5.7□□□□□ -1.5
CHD1-209ENST00000512844 TTC3P53804 2025 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 CCDC196A0A1B0GTZ2 297 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 ARHGAP10A1A4S6 786 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 TYW5A2RUC4 315 aaKnown RBP5.69□□□□□ -1.5
CHD1-209ENST00000512844 RRN3P2A6NIE6 340 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 FAM157AC9JC47 383 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 ASAP2O43150 1006 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 CEP104O60308 925 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 ADAP00813 363 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 CD72P21854 359 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 CNTFP26441 200 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 HOXD3P31249 432 aaPredicted RBP5.69□□□□□ -1.5
CHD1-209ENST00000512844 ARSFP54793 590 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 YWHAZP63104 245 aaKnown RBP5.69□□□□□ -1.5
CHD1-209ENST00000512844 TLE2Q04725 743 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHD1-209ENST00000512844 ME3Q16798 604 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 NAA35Q5VZE5 725 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 TMEM71Q6P5X7 295 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 BBS12Q6ZW61 710 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 ENGASEQ8NFI3 743 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 RAB40AQ8WXH6 277 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 TMEM204Q9BSN7 226 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 GPR63Q9BZJ6 419 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 DCLK3Q9C098 648 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 EPHX3Q9H6B9 360 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 IL1RAPL1Q9NZN1 696 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 NLKQ9UBE8 527 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 CLDN16Q9Y5I7 305 aa5.69□□□□□ -1.5
CHD1-209ENST00000512844 C17orf100A8MU93 164 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 LACTBL1A8MY62 500 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 PER2O15055 1255 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 SPRY3O43610 288 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 SLC25A17O43808 307 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 ALPLP05186 524 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 CKMT1AP12532 417 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 FOXG1P55316 489 aaPredicted RBP5.68□□□□□ -1.5
CHD1-209ENST00000512844 LINC00205P59089 165 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 VAMP2P63027 116 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 DSC1Q08554 894 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 RUNX2Q13950 521 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 RPE65Q16518 533 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 DUSP6Q16828 381 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 ODF3L2Q3SX64 289 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 FNBP1LQ5T0N5 605 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 TBC1D9BQ66K14 1250 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 RETSATQ6NUM9 610 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 SLC22A25Q6T423 547 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 MON1BQ7L1V2 547 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 CPXM2Q8N436 756 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 ZMIZ2Q8NF64 920 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 GDPD5Q8WTR4 605 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 OIT3Q8WWZ8 545 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 HERVK_113Q902F9 699 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 RNF183Q96D59 192 aa5.68□□□□□ -1.5
CHD1-209ENST00000512844 MAELQ96JY0 434 aaKnown RBP5.68□□□□□ -1.5
CHD1-209ENST00000512844 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.68□□□□□ -1.5
CHD1-209ENST00000512844 C17orf113A0A1B0GUU1 675 aa5.67□□□□□ -1.5
CHD1-209ENST00000512844 ITM2AO43736 263 aa5.67□□□□□ -1.5
CHD1-209ENST00000512844 TFPIP10646 304 aa5.67□□□□□ -1.5
CHD1-209ENST00000512844 HTR6P50406 440 aa5.67□□□□□ -1.5
CHD1-209ENST00000512844 TMEM95Q3KNT9 176 aa5.67□□□□□ -1.5
CHD1-209ENST00000512844 HSP90AB4PQ58FF6 505 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms