RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NBEAQ8NFP9 2946 aa12.83□□□□□ -0.36
VEGFA-216ENST00000512683 TMEM131Q92545 1883 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 A0A0D9SEW6 157 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 SPTY2D1-AS1A0A0U1RR47 76 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 H3BM21 787 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 K7ERQ8 282 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 SMAD6O43541 496 aaKnown RBP12.82□□□□□ -0.36
VEGFA-216ENST00000512683 BRINP1O60477 761 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 SNAP91O60641 907 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 SDC3O75056 442 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 ZMPSTE24O75844 475 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 CSF2P04141 144 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 ADRB3P13945 408 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 RRM1P23921 792 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 SULT1E1P49888 294 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 SERPINH1P50454 418 aaKnown RBP12.82□□□□□ -0.36
VEGFA-216ENST00000512683 IRAK1P51617 712 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 RNASE9P60153 205 aaKnown RBP12.82□□□□□ -0.36
VEGFA-216ENST00000512683 SGCGQ13326 291 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 DRAP1Q14919 205 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-216ENST00000512683 ARL13BQ3SXY8 428 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 POM121L1PQ3SYA9 428 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 ZCCHC8Q6NZY4 707 aaKnown RBP12.82□□□□□ -0.36
VEGFA-216ENST00000512683 C22orf39Q6P5X5 142 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 DPY19L3Q6ZPD9 716 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 DENND6BQ8NEG7 585 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 OR13H1Q8NG92 308 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 WDR48Q8TAF3 677 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 BTN2A2Q8WVV5 523 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 HIC2Q96JB3 615 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 BMFQ96LC9 184 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 C1QTNF2Q9BXJ5 285 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 DPH1Q9BZG8 443 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 POLR1BQ9H9Y6 1135 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 ZFR2Q9UPR6 939 aaKnown RBP12.82□□□□□ -0.36
VEGFA-216ENST00000512683 FADS3Q9Y5Q0 445 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 WASF2Q9Y6W5 498 aa12.82□□□□□ -0.36
VEGFA-216ENST00000512683 PLXNA2O75051 1894 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 K7ESM1 405 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 FPGTO14772 594 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 ZNF821O75541 412 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 LEFTY1O75610 366 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 PAK4O96013 591 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 UCHL3P15374 230 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 NME1P15531 152 aaKnown RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 CYP11B1P15538 503 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 PRLRP16471 622 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 EEF1GP26641 437 aaKnown RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 MLLT3P42568 568 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 PCBP4P57723 403 aaKnown RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 RHDQ02161 417 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 GNA12Q03113 381 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 TLE3Q04726 772 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 OTUD1Q5VV17 481 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 CDKAL1Q5VV42 579 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 BROXQ5VW32 411 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 GCNT7Q6ZNI0 430 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 ZNF677Q86XU0 584 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 XYLT1Q86Y38 959 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 CHST14Q8NCH0 376 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 ENOX1Q8TC92 643 aaKnown RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 GLMNQ92990 594 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 APOLD1Q96LR9 279 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 FCRL3Q96P31 734 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 SPON2Q9BUD6 331 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 CALN1Q9BXU9 219 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 OSBPL2Q9H1P3 480 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 ATP13A1Q9HD20 1204 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 UCKL1Q9NWZ5 548 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 TAB2Q9NYJ8 693 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 ZNF212Q9UDV6 495 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 IPO11Q9UI26 975 aaKnown RBP12.81□□□□□ -0.36
VEGFA-216ENST00000512683 TMEM59LQ9UK28 342 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 RAI2Q9Y5P3 530 aa12.81□□□□□ -0.36
VEGFA-216ENST00000512683 HELZ2Q9BYK8 2649 aaKnown RBP12.8□□□□□ -0.36
VEGFA-216ENST00000512683 PTPRBP23467 1997 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 I6L893 689 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-216ENST00000512683 SRGAP2O75044 1071 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 TCEA3O75764 348 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 POP4O95707 220 aaKnown RBP12.8□□□□□ -0.36
VEGFA-216ENST00000512683 MAPKAPK2P49137 400 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 RPIAP49247 311 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 SUOXP51687 545 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 CLDN6P56747 220 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 YPEL5P62699 121 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 RAPGEF1Q13905 1077 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 PTK2BQ14289 1009 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 FAM102AQ5T9C2 384 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-216ENST00000512683 PARGQ86W56 976 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 SPACA3Q8IXA5 215 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 SNRNP27Q8WVK2 155 aaKnown RBP12.8□□□□□ -0.36
VEGFA-216ENST00000512683 CASKIN2Q8WXE0 1202 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 CCDC97Q96F63 343 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-216ENST00000512683 TBCBQ99426 244 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 OSBPL1AQ9BXW6 950 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 STK33Q9BYT3 514 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 MAGEH1Q9H213 219 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 ANLNQ9NQW6 1124 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 THSD1Q9NS62 852 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 DNAJC28Q9NX36 388 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms