RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 VWC2LB2RUY7 222 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 B4DLN1 442 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 TEX28O15482 410 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 RRP8O43159 456 aaKnown RBP5.97□□□□□ -1.45
GYPB-212ENST00000511198 EIF3JO75822 258 aaKnown RBP5.97□□□□□ -1.45
GYPB-212ENST00000511198 MRPL12P52815 198 aaKnown RBP5.97□□□□□ -1.45
GYPB-212ENST00000511198 GLIPR1L2Q4G1C9 344 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 PEG10Q86TG7 708 aaKnown RBP5.97□□□□□ -1.45
GYPB-212ENST00000511198 PIGKQ92643 395 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 PGBD1Q96JS3 809 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 SMOQ99835 787 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 HEPHQ9BQS7 1158 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 C1orf43Q9BWL3 253 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 FAM49AQ9H0Q0 323 aaPredicted RBP5.97□□□□□ -1.45
GYPB-212ENST00000511198 ZNF334Q9HCZ1 680 aaPredicted RBP5.97□□□□□ -1.45
GYPB-212ENST00000511198 IL17RBQ9NRM6 502 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 MTMR4Q9NYA4 1195 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 AGAP1Q9UPQ3 857 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 POLHQ9Y253 713 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 PCDHA3Q9Y5H8 950 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 TRPV2Q9Y5S1 764 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 KAT6AQ92794 2004 aa5.97□□□□□ -1.45
GYPB-212ENST00000511198 MTCL1Q9Y4B5 1905 aaKnown RBP5.97□□□□□ -1.45
GYPB-212ENST00000511198 FBN1P35555 2871 aaKnown RBP5.96□□□□□ -1.45
GYPB-212ENST00000511198 NOTCH4Q99466 2003 aa5.96□□□□□ -1.45
GYPB-212ENST00000511198 GLUD1P00367 558 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 C1RP00736 705 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 POU2F2P09086 479 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 UBA1P22314 1058 aaKnown RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 SMARCA1P28370 1054 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 SLC16A2P36021 539 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 GRIA3P42263 894 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 PSMC1P62191 440 aaKnown RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 EXOSC9Q06265 439 aaKnown RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 HABP2Q14520 560 aaPredicted RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 WDR43Q15061 677 aaKnown RBP eCLIP5.96□□□□□ -1.46
GYPB-212ENST00000511198 PREPLQ4J6C6 727 aaPredicted RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 PMS2CLQ68D20 193 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 USP45Q70EL2 814 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 PALB2Q86YC2 1186 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 TICAM1Q8IUC6 712 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 SRRM1Q8IYB3 904 aaKnown RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 HDDC3Q8N4P3 179 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 CPA6Q8N4T0 437 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 TOR1AIP2Q8NFQ8 470 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 HDAC7Q8WUI4 952 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 IWS1Q96ST2 819 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 TIMP4Q99727 224 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 SPATA5L1Q9BVQ7 753 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 ARMT1Q9H993 441 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 CPNE5Q9HCH3 593 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 ASB6Q9NWX5 421 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 ZDHHC7Q9NXF8 308 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 CFAP97Q9P2B7 532 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 ARPP21Q9UBL0 812 aaPredicted RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 TUBE1Q9UJT0 475 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 ST3GAL5Q9UNP4 418 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 HEMK1Q9Y5R4 338 aaPredicted RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 THADAQ6YHU6 1953 aa5.96□□□□□ -1.46
GYPB-212ENST00000511198 ANKHD1Q8IWZ3 2542 aaKnown RBP5.96□□□□□ -1.46
GYPB-212ENST00000511198 CSMD2Q7Z408 3487 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 CCDC151A5D8V7 595 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 ZNF785A8K8V0 405 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 PLK4O00444 970 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 SLC16A6O15403 523 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 CBFA2T3O75081 653 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 PROP1O75360 226 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 RBMXL2O75526 392 aaKnown RBP5.95□□□□□ -1.46
GYPB-212ENST00000511198 SNUPNO95149 360 aaKnown RBP5.95□□□□□ -1.46
GYPB-212ENST00000511198 GALTP07902 379 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 GNAI3P08754 354 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 FCARP24071 287 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 SLC1A4P43007 532 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 NPTX2P47972 431 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 PIK3CGP48736 1102 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 TOB1P50616 345 aaPredicted RBP5.95□□□□□ -1.46
GYPB-212ENST00000511198 HK3P52790 923 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 SEMG2Q02383 582 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 ARHGAP40Q5TG30 622 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 CTR9Q6PD62 1173 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 GLRX5Q86SX6 157 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 EXD3Q8N9H8 876 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 ELSPBP1Q96BH3 223 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 MCRS1Q96EZ8 462 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 GPATCH3Q96I76 525 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 UROC1Q96N76 676 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 RMDN3Q96TC7 470 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 NUSAP1Q9BXS6 441 aaKnown RBP5.95□□□□□ -1.46
GYPB-212ENST00000511198 PLEKHA4Q9H4M7 779 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 MLXIPQ9HAP2 919 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 TRPV5Q9NQA5 729 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 CHST12Q9NRB3 414 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 MRPL17Q9NRX2 175 aaKnown RBP5.95□□□□□ -1.46
GYPB-212ENST00000511198 ENTPD2Q9Y5L3 495 aa5.95□□□□□ -1.46
GYPB-212ENST00000511198 ZC3H11AO75152 810 aaKnown RBP eCLIP5.94□□□□□ -1.46
GYPB-212ENST00000511198 RPS6KA5O75582 802 aa5.94□□□□□ -1.46
GYPB-212ENST00000511198 TTLL1O95922 423 aa5.94□□□□□ -1.46
GYPB-212ENST00000511198 CHEK2O96017 543 aa5.94□□□□□ -1.46
GYPB-212ENST00000511198 CHRM2P08172 466 aa5.94□□□□□ -1.46
GYPB-212ENST00000511198 WT1P19544 449 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms