RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ARHGAP42A6NI28 874 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 SOWAHDA6NJG2 315 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 PRNPP04156 253 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 IGHV4-34P06331 123 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 DPP6P42658 865 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 ID4P47928 161 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 STPG1Q5TH74 334 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 AGBL4Q5VU57 503 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 AFMIDQ63HM1 303 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 TMIEQ8NEW7 156 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 OR2T34Q8NGX1 318 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 NETO1Q8TDF5 533 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 RFFLQ8WZ73 363 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 TSC1Q92574 1164 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 ISG20Q96AZ6 181 aaKnown RBP14.22□□□□□ -0.13
DDX41-212ENST00000511040 PANX2Q96RD6 677 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 HEPHQ9BQS7 1158 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 NUSAP1Q9BXS6 441 aaKnown RBP14.22□□□□□ -0.13
DDX41-212ENST00000511040 PCED1AQ9H1Q7 454 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 DONSONQ9NYP3 566 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 UBA2Q9UBT2 640 aaPredicted RBP14.22□□□□□ -0.13
DDX41-212ENST00000511040 EVLQ9UI08 416 aaPredicted RBP14.22□□□□□ -0.13
DDX41-212ENST00000511040 SLC6A14Q9UN76 642 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 HYOU1Q9Y4L1 999 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 PCDHA13Q9Y5I0 950 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 WASF2Q9Y6W5 498 aa14.22□□□□□ -0.13
DDX41-212ENST00000511040 PI4KAP42356 2102 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 ADAMTS9Q9P2N4 1935 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3DA0A087WVF3 549 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3IA0A087WXS9 549 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3EA0A087X179 549 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3KA0A087X1G2 549 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3FA6NER0 549 aaPredicted RBP14.21□□□□□ -0.13
DDX41-212ENST00000511040 LRRC72A6NJI9 287 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3LB9A6J9 549 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 KRIT1O00522 736 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 BCAT2O15382 392 aaPredicted RBP14.21□□□□□ -0.13
DDX41-212ENST00000511040 FOXD2O60548 495 aaPredicted RBP14.21□□□□□ -0.13
DDX41-212ENST00000511040 PRAMEF11O60813 436 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 SERPINF2P08697 491 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3HP0C7X1 549 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 GNSP15586 552 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 ENGP17813 658 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 HOXD12P35452 270 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 ARSEP51690 589 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 ZNF135P52742 658 aaPredicted RBP14.21□□□□□ -0.13
DDX41-212ENST00000511040 RHOAP61586 193 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 PPP2CBP62714 309 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 PPP2CAP67775 309 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 CYTH1Q15438 398 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 SPA17Q15506 151 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 ZFYVE27Q5T4F4 411 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 PIP5KL1Q5T9C9 394 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3GQ6DHY5 549 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3CQ6IPX1 549 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 SLC23A3Q6PIS1 610 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TMCO3Q6UWJ1 677 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 LAYNQ6UX15 382 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 TBC1D3Q8IZP1 549 aaPredicted RBP14.21□□□□□ -0.13
DDX41-212ENST00000511040 KCTD6Q8NC69 237 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 OR2I1PQ8NGU4 316 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 CEP76Q8TAP6 659 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 EXOC2Q96KP1 924 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 GTPBP2Q9BX10 602 aaKnown RBP14.21□□□□□ -0.13
DDX41-212ENST00000511040 CALN1Q9BXU9 219 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 PDFQ9HBH1 243 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 CAPN10Q9HC96 672 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 DYRK4Q9NR20 520 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 LHX3Q9UBR4 397 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 INTUQ9ULD6 942 aa14.21□□□□□ -0.13
DDX41-212ENST00000511040 A0A1B0GTW7 788 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 C4orf47A7E2U8 309 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 INSIG1O15503 277 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 PLRG1O43660 514 aaKnown RBP14.2□□□□□ -0.14
DDX41-212ENST00000511040 MTA2O94776 668 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 GSRP00390 522 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 TNNT1P13805 278 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 IL4RP24394 825 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 MAT2AP31153 395 aaKnown RBP14.2□□□□□ -0.14
DDX41-212ENST00000511040 MAN1A1P33908 653 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 CYLC1P35663 651 aaPredicted RBP14.2□□□□□ -0.14
DDX41-212ENST00000511040 NOP2P46087 812 aaKnown RBP14.2□□□□□ -0.14
DDX41-212ENST00000511040 TAS2R38P59533 333 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 SNRPD1P62314 119 aaKnown RBP14.2□□□□□ -0.14
DDX41-212ENST00000511040 DPYSL3Q14195 570 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 MYLK3Q32MK0 819 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 UAP1L1Q3KQV9 507 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 RHOT2Q8IXI1 618 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 CCDC170Q8IYT3 715 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 OR2AP1Q8NGE2 309 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 GDAP1L1Q96MZ0 367 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 ANP32EQ9BTT0 268 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 EBF2Q9HAK2 575 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 SP110Q9HB58 689 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 SUSD2Q9UGT4 822 aa14.2□□□□□ -0.14
DDX41-212ENST00000511040 CXorf51AA0A1B0GTR3 108 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 DCDC2BA2VCK2 349 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 CDX4O14627 284 aaPredicted RBP14.19□□□□□ -0.14
DDX41-212ENST00000511040 SLC30A4O14863 429 aa14.19□□□□□ -0.14
DDX41-212ENST00000511040 SLC7A4O43246 635 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms