RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TAS2R38P59533 333 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 PPP2CBP62714 309 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 PPP2CAP67775 309 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 ECT2LQ008S8 904 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 BNC1Q01954 994 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 GNA12Q03113 381 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 SIM2Q14190 667 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 TCEAL1Q15170 157 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 AGBL4Q5VU57 503 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 RWDD4Q6NW29 188 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 ZC3H14Q6PJT7 736 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 LAYNQ6UX15 382 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 KDM7AQ6ZMT4 941 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 RFX8Q6ZV50 586 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 TRMT11Q7Z4G4 463 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 CNGA4Q8IV77 575 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 TMEFF1Q8IYR6 380 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 PQLC3Q8N755 202 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 SPC24Q8NBT2 197 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 OR2A12Q8NGT7 310 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 RFFLQ8WZ73 363 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 TRIM11Q96F44 468 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 ZC3H10Q96K80 434 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 CSPG4P5Q96PW8 444 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 DESI2Q9BSY9 194 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 LACRTQ9GZZ8 138 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 TNKS2Q9H2K2 1166 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 PABPC3Q9H361 631 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 DHX35Q9H5Z1 703 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 C6orf106Q9H6K1 298 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 ZWILCHQ9H900 591 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 EBF2Q9HAK2 575 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 TMEM74BQ9NUR3 256 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 SCHIP1Q9P0W5 487 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 VPS28Q9UK41 221 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 USP18Q9UMW8 372 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 THADAQ6YHU6 1953 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 BPTFQ12830 3046 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 CEP192Q8TEP8 1941 aa7.36□□□□□ -1.23
TOPBP1-207ENST00000509162 ASPMQ8IZT6 3477 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 TYW5A2RUC4 315 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 TMEM110-MUSTN1A8MSY1 372 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 RASA4BC9J798 803 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 J3KR12 359 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 WNT9AO14904 365 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 INSIG1O15503 277 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 RASA4O43374 803 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 TMCC1O94876 653 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 MAP3K6O95382 1288 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 IGHV4-34P06331 123 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 TPM3P06753 285 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 SRPRAP08240 638 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 H2AFZP0C0S5 128 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 ERCC2P18074 760 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 AMPD1P23109 780 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 ITPKAP23677 461 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 OR1E1P30953 314 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 MAN1A1P33908 653 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 GJC1P36383 396 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 PSMD8P48556 350 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 ADCY2Q08462 1091 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 SPEM2Q0P670 501 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 ZNF177Q13360 481 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 DPYSL3Q14195 570 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 SF3A2Q15428 464 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 DLG2Q15700 870 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 POM121L1PQ3SYA9 428 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 ATXN7L2Q5T6C5 722 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 PIP5KL1Q5T9C9 394 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 NCBP2-AS2Q69YL0 99 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 LAIR1Q6GTX8 287 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 PPP1R2P3Q6NXS1 205 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 C16orf46Q6P387 395 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 H2AFVQ71UI9 128 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 POLNQ7Z5Q5 900 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 SETD3Q86TU7 594 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 FAM124AQ86V42 546 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 ZSWIM9Q86XI8 627 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 TMPRSS6Q8IU80 811 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 MMAAQ8IVH4 418 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 LINC00528Q8N1L1 170 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 UMODL1-AS1Q8N2C9 162 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 KDM1BQ8NB78 822 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 OR6K2Q8NGY2 324 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 PCDH19Q8TAB3 1148 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 SLC35G2Q8TBE7 412 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 RAPGEF5Q92565 580 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 HSPH1Q92598 858 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 KRT35Q92764 455 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 FAF2Q96CS3 445 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 TOE1Q96GM8 510 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 PANX2Q96RD6 677 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 SLC39A8Q9C0K1 460 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 PRDM16Q9HAZ2 1276 aa7.35□□□□□ -1.23
TOPBP1-207ENST00000509162 ATP13A1Q9HD20 1204 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms