RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 LTA4HP09960 611 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 MCF2P10911 925 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PDGFRAP16234 1089 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 AOC1P19801 751 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 CHMP24386 653 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 CTNNA2P26232 953 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PBLDP30039 288 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 CHRNA3P32297 505 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 RAP1GAPP47736 663 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 MASP1P48740 699 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 RNF144AP50876 292 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 HSPA2P54652 639 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 GPX6P59796 221 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 RNF4P78317 190 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PCDH1Q08174 1060 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 EXOC3L4Q17RC7 722 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 POMZP3Q6PJE2 187 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 BRAT1Q6PJG6 821 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 KRT74Q7RTS7 529 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ZNF438Q7Z4V0 828 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 TRABD2AQ86V40 505 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 SLC22A16Q86VW1 577 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PHTF2Q8N3S3 785 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PIK3C3Q8NEB9 887 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 DEPDC1BQ8WUY9 529 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 DLG3Q92796 817 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 CCDC120Q96HB5 630 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 SORT1Q99523 831 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ZNF416Q9BWM5 594 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 JMJD4Q9H9V9 463 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 CRLF2Q9HC73 371 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 STRN4Q9NRL3 753 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 C20orf96Q9NUD7 363 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 KCNK4Q9NYG8 393 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 DENND2AQ9ULE3 1009 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ZFR2Q9UPR6 939 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 GRIP1Q9Y3R0 1128 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 MRC1P22897 1456 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ADAMTS13Q76LX8 1427 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 RTCAO00442 366 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ABCD4O14678 606 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ZBTB5O15062 677 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ZBTB43O43298 467 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 FZD6O60353 706 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ZNF780AO75290 641 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 TTC4O95801 387 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PLEKP08567 350 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 CYP21A2P08686 494 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 HBQ1P09105 142 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 DLDP09622 509 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 KELP23276 732 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 KLRC1P26715 233 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PTGIRP43119 386 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 MAGEA4P43358 317 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 SOX9P48436 509 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 MEOX2P50222 304 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 DGKQP52824 942 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 YWHAEP62258 255 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 SEMA3BQ13214 749 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 NR5A1Q13285 461 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ZNF273Q14593 569 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PSMD5Q16401 504 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 SLC18A3Q16572 532 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PERM1Q5SV97 790 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PDSS1Q5T2R2 415 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 FUT10Q6P4F1 479 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 KIAA1324Q6UXG2 1013 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 HEATR3Q7Z4Q2 680 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 GPAT4Q86UL3 456 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 TXNDC2Q86VQ3 553 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 MIB1Q86YT6 1006 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 P3H2Q8IVL5 708 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 GPALPP1Q8IXQ4 340 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 DCP1BQ8IZD4 617 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 GSTCDQ8NEC7 633 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 OR13F1Q8NGS4 319 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ZFAND1Q8TCF1 268 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 URGCPQ8TCY9 931 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 SNX19Q92543 992 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 AKAP1Q92667 903 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 GTF2H4Q92759 462 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 CMTM3Q96MX0 182 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 NPHS2Q9NP85 383 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 PCDHB16Q9NRJ7 776 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 RGS18Q9NS28 235 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 FAM217BQ9NTX9 383 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ADPRHL2Q9NX46 363 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 TJP2Q9UDY2 1190 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 GGA1Q9UJY5 639 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 ST14Q9Y5Y6 855 aa10.95□□□□□ -0.66
PDLIM5-210ENST00000508216 NDUFS6O75380 124 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 RBBP9O75884 186 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 RHOBTB1O94844 696 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 RASGRP1O95267 797 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 GGPS1O95749 300 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 SERPING1P05155 500 aa10.94□□□□□ -0.66
PDLIM5-210ENST00000508216 ASNSP08243 561 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms