RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 ATP5OP48047 213 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 EIF3EP60228 445 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 AP1B1Q10567 949 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 CAMK2GQ13555 558 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 HNRNPDQ14103 355 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 LBRQ14739 615 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 CRY1Q16526 586 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 LONRF2Q1L5Z9 754 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 SLC45A4Q5BKX6 768 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 C9orf64Q5T6V5 341 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 TEX26Q8N6G2 289 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 SLC35B2Q8TB61 432 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 ACTRT1Q8TDG2 376 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 NSMCE1Q8WV22 266 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 TFB1MQ8WVM0 346 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 MAIP1Q8WWC4 291 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 ATG4AQ8WYN0 398 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 ERLEC1Q96DZ1 483 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 ZNF419Q96HQ0 510 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 TNKS2Q9H2K2 1166 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 PRSS16Q9NQE7 514 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 SMARCAL1Q9NZC9 954 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 SEPT3Q9UH03 358 aa13.69□□□□□ -0.22
UBE2D3-221ENST00000507845 PRR33A8MZF0 331 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 KIF2AO00139 706 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 KCNK1O00180 336 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 PGRMC1O00264 195 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 SYNCRIPO60506 623 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 GSRP00390 522 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 RBP3P10745 1247 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 CCNB1P14635 433 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 AVPR2P30518 371 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 RENBPP51606 427 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 RHOAP61586 193 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 IFI35P80217 286 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 FOXK1P85037 733 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 SATB1Q01826 763 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 STARD3Q14849 445 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 MARC1Q5VT66 337 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 CDKL3Q8IVW4 592 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 PLPP6Q8IY26 295 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 PGBD5Q8N414 524 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 DTWD2Q8NBA8 298 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 TSEN2Q8NCE0 465 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 OR2A12Q8NGT7 310 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 C1orf54Q8WWF1 131 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 PSKH2Q96QS6 385 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 IL12RB2Q99665 862 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 CINPQ9BW66 212 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 FRMD8P1Q9BZ68 369 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 TM6SF2Q9BZW4 377 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 C10orf88Q9H8K7 445 aa13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 SPATA6Q9NWH7 488 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-221ENST00000507845 PLXND1Q9Y4D7 1925 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 BCLAF3A2AJT9 711 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 MUSKO15146 869 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 MTSS1O43312 755 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 LIASO43766 372 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 PAPSS2O95340 614 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 JCHAINP01591 159 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 TUBB4AP04350 444 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 RBL1P28749 1068 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 MMP13P45452 471 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 RGRP47804 291 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 CXCL12P48061 93 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 CCR3P51677 355 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 DGKEP52429 567 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 WASHC5Q12768 1159 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 ZBTB17Q13105 803 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 ZNF235Q14590 738 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 CARD16Q5EG05 197 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 TMEM31Q5JXX7 168 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 ATXN7L2Q5T6C5 722 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 DARS2Q6PI48 645 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 DPY19L3Q6ZPD9 716 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 CREG2Q8IUH2 290 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 STK40Q8N2I9 435 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 PRELID2Q8N945 189 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 CHST14Q8NCH0 376 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 OR2AP1Q8NGE2 309 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 OR2T3Q8NH03 318 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 NKD2Q969F2 451 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 EXOC2Q96KP1 924 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 CAPZA3Q96KX2 299 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 FAM129BQ96TA1 746 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 NAP1L3Q99457 506 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 C1QTNF1Q9BXJ1 281 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 FBRSQ9HAH7 460 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 NT5MQ9NPB1 228 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 PRMT8Q9NR22 394 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 RBM22Q9NW64 420 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 SEPT10Q9P0V9 454 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 DNPEPQ9ULA0 475 aa13.67□□□□□ -0.22
UBE2D3-221ENST00000507845 TCRBV21S2A2A0A5A6 115 aa13.66□□□□□ -0.22
UBE2D3-221ENST00000507845 K7ESF4 209 aa13.66□□□□□ -0.22
UBE2D3-221ENST00000507845 DLL1O00548 723 aa13.66□□□□□ -0.22
UBE2D3-221ENST00000507845 BNIP3LO60238 219 aa13.66□□□□□ -0.22
UBE2D3-221ENST00000507845 IGSF6O95976 241 aa13.66□□□□□ -0.22
UBE2D3-221ENST00000507845 HLA-DQB2P05538 268 aa13.66□□□□□ -0.22
UBE2D3-221ENST00000507845 PTPN3P26045 913 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms