RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 MAGEA6P43360 314 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 MMP13P45452 471 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 SOX9P48436 509 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 SERPINH1P50454 418 aaKnown RBP7.32□□□□□ -1.24
NUP54-204ENST00000506098 GALK1P51570 392 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 NRLP54845 237 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 CBLBQ13191 982 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 ENPP2Q13822 863 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 E2F5Q15329 346 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 PPP1R7Q15435 360 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 SLC14A2Q15849 920 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 PTPRNQ16849 979 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 PARP6Q2NL67 630 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 SLC44A4Q53GD3 710 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 TMEM196Q5HYL7 178 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 RALGPS1Q5JS13 557 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 ITPRIPL1Q6GPH6 555 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 CCDC70Q6NSX1 233 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 PID1Q7Z2X4 250 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 ZNF354CQ86Y25 554 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 BBS5Q8N3I7 341 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 SDR16C5Q8N3Y7 309 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 PGBD5Q8N414 524 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 TSEN2Q8NCE0 465 aaKnown RBP7.32□□□□□ -1.24
NUP54-204ENST00000506098 TTC8Q8TAM2 541 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 CCDC110Q8TBZ0 833 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 KCNV2Q8TDN2 545 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 TADA1Q96BN2 335 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 PPP1R2P1Q96PQ5 205 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 FCRL5Q96RD9 977 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 P2RY13Q9BPV8 354 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 MGME1Q9BQP7 344 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 TRIM51Q9BSJ1 452 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 FAM129AQ9BZQ8 928 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 CEP44Q9C0F1 390 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 RAB17Q9H0T7 212 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 GBA3Q9H227 469 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 GLOD4Q9HC38 313 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 FBRSL1Q9HCM7 1045 aaKnown RBP7.32□□□□□ -1.24
NUP54-204ENST00000506098 MED4Q9NPJ6 270 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 HAUS2Q9NVX0 235 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 RBM22Q9NW64 420 aaKnown RBP eCLIP7.32□□□□□ -1.24
NUP54-204ENST00000506098 WHRNQ9P202 907 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 THAP10Q9P2Z0 257 aaPredicted RBP7.32□□□□□ -1.24
NUP54-204ENST00000506098 LHX3Q9UBR4 397 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 WNT16Q9UBV4 365 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 SEPT3Q9UH03 358 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 DMGDHQ9UI17 866 aaKnown RBP7.32□□□□□ -1.24
NUP54-204ENST00000506098 UTP11Q9Y3A2 253 aaKnown RBP7.32□□□□□ -1.24
NUP54-204ENST00000506098 ACTL7AQ9Y615 435 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 PIAS3Q9Y6X2 628 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 ANKRD12Q6UB98 2062 aa7.32□□□□□ -1.24
NUP54-204ENST00000506098 PI4KAP42356 2102 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 TBC1D3BA6NDS4 549 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 K7EQS6 105 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 SMAPO00193 183 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 MAN2B1O00754 1011 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 DNALI1O14645 258 aaPredicted RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 NDC80O14777 642 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 MUSKO15146 869 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 TP73O15350 636 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 PSMD3O43242 534 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 SMAD6O43541 496 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 TMCC1O94876 653 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 HEXIM1O94992 359 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 METTL18O95568 372 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 GSRP00390 522 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 IFNB1P01574 187 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 MMP2P08253 660 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 ZSCAN5DPP0CG00 497 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 ITIH2P19823 946 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 TNFRSF8P28908 595 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 NNMTP40261 264 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 KIR2DL1P43626 348 aaPredicted RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 RPL21P46778 160 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 STK19P49842 368 aaPredicted RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 SLC7A5Q01650 507 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 PRKCQQ04759 706 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 KDSRQ06136 332 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 GPS1Q13098 491 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 SEMA5AQ13591 1074 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 ZNF235Q14590 738 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 MLF2Q15773 248 aaPredicted RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 TEX35Q5T0J7 233 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 IER5LQ5T953 404 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 KCTD11Q693B1 232 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 NAIF1Q69YI7 327 aaPredicted RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 TXNDC11Q6PKC3 985 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 LINGO4Q6UY18 593 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 ARHGEF18Q6ZSZ5 1173 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 PCGF5Q86SE9 256 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 PRUNE1Q86TP1 453 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 RNF135Q8IUD6 432 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 UBALD2Q8IYN6 164 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 KMT2EQ8IZD2 1858 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 GPR161Q8N6U8 529 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 PCDH20Q8N6Y1 951 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 EIF1ADQ8N9N8 165 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 MYRIPQ8NFW9 859 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 ARRDC2Q8TBH0 407 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms