RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 FBXO40Q9UH90 709 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 ARHGAP26Q9UNA1 814 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 CYP46A1Q9Y6A2 500 aa4.32□□□□□ -1.72
TOPBP1-204ENST00000505804 C17orf113A0A1B0GUU1 675 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 C17orf102A2RUQ5 167 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 TNPO2O14787 897 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 MDM4O15151 490 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 SLC25A17O43808 307 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 IFNA2P01563 188 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 PSG1P11464 419 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 ATP1A3P13637 1013 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 GPD2P43304 727 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 ARSFP54793 590 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 PTGR1Q14914 329 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 PRTGQ2VWP7 1150 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 EDRF1Q3B7T1 1238 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 ODF3L2Q3SX64 289 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 C17orf99Q6UX52 265 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 MOB3CQ70IA8 216 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 SERPINA11Q86U17 422 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 CHD1LQ86WJ1 897 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 CAMK1DQ8IU85 385 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 TCP11L2Q8N4U5 519 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 PLD5Q8N7P1 536 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 NAXEQ8NCW5 288 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 TNIP2Q8NFZ5 429 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 OR4N2Q8NGD1 307 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 NLRP4Q96MN2 994 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 MPHOSPH8Q99549 860 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 LBHD1Q9BQE6 289 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 IL1RAPL1Q9NZN1 696 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 PEMTQ9UBM1 199 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 SLC25A10Q9UBX3 287 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 TTC3P53804 2025 aa4.31□□□□□ -1.72
TOPBP1-204ENST00000505804 GOLGA6L10A0A0M3HER8 536 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 PABPN1LA6NDY0 278 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 SYF2O95926 243 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 YWHAQP27348 245 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ABCD3P28288 659 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 PTGER1P34995 402 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 PAFAH1B1P43034 410 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 POU5F1BQ06416 359 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ZNF667Q5HYK9 610 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 Q5PR19 223 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 FAM69AQ5T7M9 428 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 NAA35Q5VZE5 725 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 FAM83HQ6ZRV2 1179 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 TRAPPC11Q7Z392 1133 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 CTU1Q7Z7A3 348 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 PIM3Q86V86 326 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ZDHHC23Q8IYP9 409 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 TSPYL6Q8N831 410 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ENGASEQ8NFI3 743 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 CEP76Q8TAP6 659 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ZCCHC10Q8TBK6 192 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 GDPD5Q8WTR4 605 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 TBC1D22AQ8WUA7 517 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ZUFSPQ96AP4 578 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 HMCESQ96FZ2 354 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ZNF333Q96JL9 665 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 PPM1MQ96MI6 270 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ZNF48Q96MX3 618 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 AGXT2Q9BYV1 514 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ISCUQ9H1K1 167 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 PREBQ9HCU5 417 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 WDR6Q9NNW5 1121 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 SIRT3Q9NTG7 399 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 BEX4Q9NWD9 120 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 SEL1LQ9UBV2 794 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 PCDHGB5Q9Y5G0 923 aa4.3□□□□□ -1.72
TOPBP1-204ENST00000505804 ADGRF5Q8IZF2 1346 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 ARHGAP10A1A4S6 786 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 GAGE10A6NGK3 116 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 H0YGN5 161 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 H3BNX3 289 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 TSPAN4O14817 238 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 KIF1CO43896 1103 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 KLKB1P03952 638 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 CHRNB2P17787 502 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 AVPR1AP37288 418 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 PPP3CCP48454 512 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 CCT4P50991 539 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 UFM1P61960 85 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 EFNB1P98172 346 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 SLC18A2Q05940 514 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 TBX2Q13207 712 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 SLC4A8Q2Y0W8 1093 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 LEXMQ3ZCV2 418 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 EPHA10Q5JZY3 1008 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 ACAD10Q6JQN1 1059 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 HEPHL1Q6MZM0 1159 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 PARM1Q6UWI2 310 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 LPAR1Q92633 364 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 VCPIP1Q96JH7 1222 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 HEMGNQ9BXL5 484 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 SLC26A6Q9BXS9 759 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 LHPPQ9H008 270 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 JMJD4Q9H9V9 463 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 BABAM1Q9NWV8 329 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms