RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SLC8A1P32418 973 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 CCNHP51946 323 aaPredicted RBP25.53■■□□□ 1.68
LSM6-202ENST00000502781 COPS2P61201 443 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 SNRPD1P62314 119 aaKnown RBP25.53■■□□□ 1.68
LSM6-202ENST00000502781 CCDC173Q0VFZ6 552 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 TFDP2Q14188 446 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 PLK5Q496M5 336 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 TTC31Q49AM3 519 aaPredicted RBP25.53■■□□□ 1.68
LSM6-202ENST00000502781 RFX6Q8HWS3 928 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 PIP4K2CQ8TBX8 421 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 DUSP15Q9H1R2 295 aaPredicted RBP25.53■■□□□ 1.68
LSM6-202ENST00000502781 WSB2Q9NYS7 404 aaPredicted RBP25.53■■□□□ 1.68
LSM6-202ENST00000502781 IL1BP01584 269 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 KRT10P13645 584 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 MX2P20592 715 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 PTPN7P35236 360 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 PSMD8P48556 350 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 DNA2P51530 1060 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 RHOAP61586 193 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 ADCY2Q08462 1091 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 TMCO4Q5TGY1 634 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 FAM46CQ5VWP2 391 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 CEP68Q76N32 757 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 KBTBD6Q86V97 674 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 AADATQ8N5Z0 425 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 FATE1Q969F0 183 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 GDAP1L1Q96MZ0 367 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 OLFM3Q96PB7 478 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 HEPHQ9BQS7 1158 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 PACSIN2Q9UNF0 486 aaPredicted RBP25.52■■□□□ 1.68
LSM6-202ENST00000502781 EFR3BQ9Y2G0 817 aa25.52■■□□□ 1.68
LSM6-202ENST00000502781 MAP3K6O95382 1288 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 PRNPP04156 253 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 CD6P30203 668 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 OXTRP30559 389 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 DRD3P35462 400 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 METAP1P53582 386 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 SLC10A7Q0GE19 358 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 PMS2CLQ68D20 193 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 SLC36A4Q6YBV0 504 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 NKD2Q969F2 451 aaPredicted RBP25.51■■□□□ 1.67
LSM6-202ENST00000502781 HDAC11Q96DB2 347 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 LRIG1Q96JA1 1093 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 PSKH2Q96QS6 385 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 SERGEFQ9UGK8 458 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 IL36AQ9UHA7 158 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 SMG5Q9UPR3 1016 aaKnown RBP25.51■■□□□ 1.67
LSM6-202ENST00000502781 MYO15AQ9UKN7 3530 aa25.51■■□□□ 1.67
LSM6-202ENST00000502781 ABCA7Q8IZY2 2146 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 C1QTNF3-AMACRE9PGA6 284 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 RNF103O00237 685 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 CST8O60676 142 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 POP4O95707 220 aaKnown RBP25.5■■□□□ 1.67
LSM6-202ENST00000502781 CCNCP24863 283 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 CSNK1DP48730 415 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 SFSWAPQ12872 951 aaKnown RBP25.5■■□□□ 1.67
LSM6-202ENST00000502781 LBRQ14739 615 aaKnown RBP25.5■■□□□ 1.67
LSM6-202ENST00000502781 MYLK3Q32MK0 819 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 SPDYCQ5MJ68 293 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 ATXN7L2Q5T6C5 722 aaPredicted RBP25.5■■□□□ 1.67
LSM6-202ENST00000502781 CCDC50Q8IVM0 306 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 REXO1L1PQ8IX06 675 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 UBL4BQ8N7F7 174 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 TSEN2Q8NCE0 465 aaKnown RBP25.5■■□□□ 1.67
LSM6-202ENST00000502781 MAML1Q92585 1016 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 TOE1Q96GM8 510 aaKnown RBP25.5■■□□□ 1.67
LSM6-202ENST00000502781 FBXL12Q9NXK8 326 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 OTOGLQ3ZCN5 2332 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 VPS13AQ96RL7 3174 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 DMDP11532 3685 aa25.5■■□□□ 1.67
LSM6-202ENST00000502781 LEFTY1O75610 366 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 IGSF6O95976 241 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 LMNAP02545 664 aaKnown RBP25.49■■□□□ 1.67
LSM6-202ENST00000502781 PYGMP11217 842 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 TGM2P21980 687 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 NR2C2P49116 596 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 NSUN2Q08J23 767 aaKnown RBP eCLIP25.49■■□□□ 1.67
LSM6-202ENST00000502781 ARSIQ5FYB1 569 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 NPNTQ6UXI9 565 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 PRR23BQ6ZRT6 265 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 BBS12Q6ZW61 710 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 HERPUD2Q9BSE4 406 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 SEPT3Q9UH03 358 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 FZD4Q9ULV1 537 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 HEY1Q9Y5J3 304 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 SPAG17Q6Q759 2223 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 SDK1Q7Z5N4 2213 aa25.49■■□□□ 1.67
LSM6-202ENST00000502781 MUSKO15146 869 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 RGRP47804 291 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 DYNLT1P63172 113 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 ZNF33AQ06730 810 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 PPIDQ08752 370 aaKnown RBP25.48■■□□□ 1.67
LSM6-202ENST00000502781 HNRNPDQ14103 355 aaKnown RBP25.48■■□□□ 1.67
LSM6-202ENST00000502781 LLGL1Q15334 1064 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 MEI1Q5TIA1 1274 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 KAZNQ674X7 775 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 HDDC3Q8N4P3 179 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 TEX26Q8N6G2 289 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 TRIM58Q8NG06 486 aa25.48■■□□□ 1.67
LSM6-202ENST00000502781 OR6K2Q8NGY2 324 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms