RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ENY2Q9NPA8 101 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NDOR1Q9UHB4 597 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 PACSIN3Q9UKS6 424 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NLRP1Q9C000 1473 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 QSOX1O00391 747 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 IPO13O94829 963 aaKnown RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 STAG3L1P0CL83 205 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 EMC2Q15006 297 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 LSM12Q3MHD2 195 aaKnown RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF589Q86UQ0 364 aaPredicted RBP11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 OR14K1Q8NGZ2 314 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NXPE2Q96DL1 559 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 ACOX2Q99424 681 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 NPAS2Q99743 824 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 SYT4Q9H2B2 425 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 C19orf12Q9NSK7 152 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 TOR4AQ9NXH8 423 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 OR10H1Q9Y4A9 318 aa11.32□□□□□ -0.6
AC055713.1-201ENST00000498967 USP6P35125 1406 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CRKLP46109 303 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CDK9P50750 372 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 RPL10AP62906 217 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ZCCHC12Q6PEW1 402 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 MCFD2Q8NI22 146 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 PCDHGB2Q9Y5G2 931 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 AIPO00170 330 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 PECAM1P16284 738 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 MGAT5BQ3V5L5 792 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CBWD3Q5JTY5 395 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CBWD5Q5RIA9 395 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ACSM2BQ68CK6 577 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF549Q6P9A3 640 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 USP17L2Q6R6M4 530 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 FAM131AQ6UXB0 335 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 PDPRQ8NCN5 879 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 PRICKLE1Q96MT3 831 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 MMP19Q99542 508 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 GABBR1Q9UBS5 961 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CPSF1Q10570 1443 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ADGRL3Q9HAR2 1447 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ANKDD1BA6NHY2 528 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 MPZL2O60487 215 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 POMCP01189 267 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 IFNA21P01568 189 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 HOXA13P31271 388 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 RPL5P46777 297 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ARCN1P48444 511 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 NAB1Q13506 487 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 LCN1P1Q5VSP4 162 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 FIP1L1Q6UN15 594 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 DGLUCYQ7Z3D6 616 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 RAET1EQ8TD07 263 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ZCCHC17Q9NP64 241 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ITIH6Q6UXX5 1313 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 TFECO14948 347 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CLPXO76031 633 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 KCNA5P22460 613 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ERP29P30040 261 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 SLC45A4Q5BKX6 768 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 PNPT1Q8TCS8 783 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 SYN2Q92777 582 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 RERGQ96A58 199 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 IFT80Q9P2H3 777 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 VPS4AQ9UN37 437 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF521Q96K83 1311 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 TRIM64CA6NLI5 447 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 KCNK1O00180 336 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CYP2C9P11712 490 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF37AP17032 561 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 KYAT3Q6YP21 454 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 TRMT11Q7Z4G4 463 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF554Q86TJ5 538 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 MCEMP1Q8IX19 187 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 OR8H3Q8N146 312 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 SH2D3CQ8N5H7 860 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ANKFN1Q8N957 763 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 VANGL2Q9ULK5 521 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 TLX3O43711 291 aaPredicted RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 SERPINE1P05121 402 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ZNF12P17014 697 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 MAPK9P45984 424 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ATXN1P54253 815 aaKnown RBP11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CARD16Q5EG05 197 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CNSTQ6PJW8 725 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 RASGRP2Q7LDG7 609 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 HM13Q8TCT9 377 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 TRPS1Q9UHF7 1281 aa11.31□□□□□ -0.6
AC055713.1-201ENST00000498967 CLCA1A8K7I4 914 aa11.3□□□□□ -0.6
AC055713.1-201ENST00000498967 TTMPQ5BVD1 217 aa11.3□□□□□ -0.6
AC055713.1-201ENST00000498967 ARSJQ5FYB0 599 aaPredicted RBP11.3□□□□□ -0.6
AC055713.1-201ENST00000498967 IQSEC1Q6DN90 963 aa11.3□□□□□ -0.6
AC055713.1-201ENST00000498967 C7orf50Q9BRJ6 194 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms