RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CATSPERBQ9H7T0 1116 aa15.64■□□□□ 0.09
NUP50-219ENST00000497960 LUC7LQ9NQ29 371 aaKnown RBP15.64■□□□□ 0.09
NUP50-219ENST00000497960 AASDHPPTQ9NRN7 309 aa15.64■□□□□ 0.09
NUP50-219ENST00000497960 NDFIP2Q9NV92 336 aa15.64■□□□□ 0.09
NUP50-219ENST00000497960 ANKRD6Q9Y2G4 727 aa15.64■□□□□ 0.09
NUP50-219ENST00000497960 PLRG1O43660 514 aaKnown RBP15.63■□□□□ 0.09
NUP50-219ENST00000497960 RNF8O76064 485 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 CTSLP07711 333 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 H2AFZP0C0S5 128 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 ZNF883P0CG24 379 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 NUDT1P36639 197 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 BNC1Q01954 994 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 SPA17Q15506 151 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 SLC45A4Q5BKX6 768 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 CARD16Q5EG05 197 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 AGBL4Q5VU57 503 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 DPY19L3Q6ZPD9 716 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 H2AFVQ71UI9 128 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 PRPF39Q86UA1 669 aaKnown RBP15.63■□□□□ 0.09
NUP50-219ENST00000497960 TMEM139Q8IV31 216 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 CHST14Q8NCH0 376 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 GRIN3AQ8TCU5 1115 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 FNIP1Q8TF40 1166 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 PPP1R16AQ96I34 528 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 SLC6A18Q96N87 628 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 ORAI3Q9BRQ5 295 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 PACSIN1Q9BY11 444 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 MRPL47Q9HD33 250 aaKnown RBP15.63■□□□□ 0.09
NUP50-219ENST00000497960 DONSONQ9NYP3 566 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 IL36AQ9UHA7 158 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 NEU3Q9UQ49 428 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 FCF1Q9Y324 198 aaKnown RBP15.63■□□□□ 0.09
NUP50-219ENST00000497960 PCDHB9Q9Y5E1 797 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 SNX11Q9Y5W9 270 aa15.63■□□□□ 0.09
NUP50-219ENST00000497960 ACACBO00763 2458 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 TMEM191CA6NGB0 347 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 ZSCAN5CA6NGD5 496 aaPredicted RBP15.62■□□□□ 0.09
NUP50-219ENST00000497960 EIF3CLB5ME19 914 aaKnown RBP15.62■□□□□ 0.09
NUP50-219ENST00000497960 VILLO15195 856 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 FGF10O15520 208 aaPredicted RBP15.62■□□□□ 0.09
NUP50-219ENST00000497960 SH3BP5O60239 455 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 NDUFA10O95299 355 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 PMLP29590 882 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 HTR7P34969 479 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 TPI1P60174 286 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 SUZ12Q15022 739 aaKnown RBP15.62■□□□□ 0.09
NUP50-219ENST00000497960 ARSIQ5FYB1 569 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 LAYNQ6UX15 382 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 RAD9BQ6WBX8 426 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 ISG20Q96AZ6 181 aaKnown RBP15.62■□□□□ 0.09
NUP50-219ENST00000497960 SERAC1Q96JX3 654 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 EIF3CQ99613 913 aaKnown RBP15.62■□□□□ 0.09
NUP50-219ENST00000497960 NCAPGQ9BPX3 1015 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 HEPHQ9BQS7 1158 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 IL21RQ9HBE5 538 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 PREBQ9HCU5 417 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 TM7SF3Q9NS93 570 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 ANGPTL2Q9UKU9 493 aa15.62■□□□□ 0.09
NUP50-219ENST00000497960 FNDC3AQ9Y2H6 1198 aaKnown RBP15.62■□□□□ 0.09
NUP50-219ENST00000497960 NYNRINQ9P2P1 1898 aaKnown RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 WASH4PA8MWX3 477 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 C10orf142B7Z368 130 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 LATO43561 262 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 BUB1O43683 1085 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 KDELR3O43731 214 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 PRPSAP2O60256 369 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 ZNF821O75541 412 aaPredicted RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 LEFTY1O75610 366 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 TMEM253P0C7T8 217 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 YBEYP58557 167 aaPredicted RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 PPP2CBP62714 309 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 PPP2CAP67775 309 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 SIM1P81133 766 aaPredicted RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 ERN2Q76MJ5 926 aaKnown RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 TRIM69Q86WT6 500 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 NAXDQ8IW45 347 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 PLPP6Q8IY26 295 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 RYBPQ8N488 228 aaPredicted RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 SETD7Q8WTS6 366 aaKnown RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 ARRDC3Q96B67 414 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 ARHGEF26Q96DR7 871 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 NUP85Q9BW27 656 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 TM6SF2Q9BZW4 377 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 EBF2Q9HAK2 575 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 HECAQ9UBI9 543 aaPredicted RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 PCSK1NQ9UHG2 260 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 AP4E1Q9UPM8 1137 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 DMTF1Q9Y222 760 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 PCDHGB2Q9Y5G2 931 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 ACTL7AQ9Y615 435 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 EPN1Q9Y6I3 576 aaPredicted RBP15.61■□□□□ 0.09
NUP50-219ENST00000497960 WASF2Q9Y6W5 498 aa15.61■□□□□ 0.09
NUP50-219ENST00000497960 SPAARA0A1B0GVQ0 90 aa15.6■□□□□ 0.09
NUP50-219ENST00000497960 RASA4BC9J798 803 aa15.6■□□□□ 0.09
NUP50-219ENST00000497960 EEF2KO00418 725 aaKnown RBP15.6■□□□□ 0.09
NUP50-219ENST00000497960 RASA4O43374 803 aa15.6■□□□□ 0.09
NUP50-219ENST00000497960 DFNA5O60443 496 aa15.6■□□□□ 0.09
NUP50-219ENST00000497960 CD160O95971 181 aa15.6■□□□□ 0.09
NUP50-219ENST00000497960 CYP1A2P05177 515 aa15.6■□□□□ 0.09
NUP50-219ENST00000497960 CD38P28907 300 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms