RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 XYLBO75191 536 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 LSM8O95777 96 aaKnown RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 HNRNPLP14866 589 aaKnown RBP eCLIP13.24□□□□□ -0.292e-7■■■□□ 18.8
GAPVD1-220ENST00000497580 LRPAP1P30533 357 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 POLR2IP36954 125 aaKnown RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 GP5P40197 560 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 TNFSF9P41273 254 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 OXA1LQ15070 435 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 KIZQ2M2Z5 673 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 ARL13BQ3SXY8 428 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 PAGE2BQ5JRK9 111 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 PPP2R2DQ66LE6 453 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 CCDC60Q8IWA6 550 aaPredicted RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 SGCDQ92629 289 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 MIR1-1HGQ9H1L0 117 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 RAP2CQ9Y3L5 183 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 TRAF6Q9Y4K3 522 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 ATP6AP2A0A1C7CYW4 349 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 TRIM64CA6NLI5 447 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 TMEM114B3SHH9 223 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 ATP6AP2O75787 350 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 SRP72O76094 671 aaKnown RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 ENO2P09104 434 aaPredicted RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 ATP6V1B2P21281 511 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 TTKP33981 857 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC13A2Q13183 592 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 CAMK2BQ13554 666 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 FASTKQ14296 549 aaKnown RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 MAPRE1Q15691 268 aaKnown RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 CLPPQ16740 277 aaPredicted RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 PPP4R4Q6NUP7 873 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 TAS1R3Q7RTX0 852 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 CALML6Q8TD86 181 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 NRBF2Q96F24 287 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 ACE2Q9BYF1 805 aaPredicted RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 NANOGQ9H9S0 305 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 AGO4Q9HCK5 861 aaKnown RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 MOCS1Q9NZB8 636 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 DHX15O43143 795 aaKnown RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 PAPSS1O43252 624 aaPredicted RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SYNCRIPO60506 623 aaKnown RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 C2P06681 752 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 HSPA8P11142 646 aaKnown RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 YWHAEP62258 255 aaKnown RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 IMPG1Q17R60 797 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 INAVAQ3KP66 663 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 REP15Q6BDI9 236 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 MAMDC4Q6UXC1 1216 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 RPS27LQ71UM5 84 aaKnown RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC22A16Q86VW1 577 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SHCBP1Q8NEM2 672 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 CPB2Q96IY4 423 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 PIWIL1Q96J94 861 aaKnown RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 ARPC5LQ9BPX5 153 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 PIF1Q9H611 641 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 CYP4F12Q9HCS2 524 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SPAG4Q9NPE6 437 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 G3V2L1 256 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 K7ERI5 159 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF701M0R085 212 aaPredicted RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 MAFGO15525 162 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 GRID2O43424 1007 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 CCNE2O96020 404 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 TNK2Q07912 1038 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SELENBP1Q13228 472 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 PDK2Q15119 407 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 IQSEC1Q6DN90 963 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 B3GNT9Q6UX72 402 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 CDR2LQ86X02 465 aaPredicted RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF354CQ86Y25 554 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 ACVR1CQ8NER5 493 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 PCDH19Q8TAB3 1148 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SNX19Q92543 992 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 IL12RB2Q99665 862 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 APOL2Q9BQE5 337 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 TP63Q9H3D4 680 aaPredicted RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 FAM49BQ9NUQ9 324 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 TNPO2O14787 897 aaKnown RBP13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SNAP29O95721 258 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 DLGAP3O95886 979 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SEPHS1P49903 392 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 FPGSQ05932 587 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF846Q147U1 533 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SPCS2Q15005 226 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 FSTL4Q6MZW2 842 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SWSAP1Q6NVH7 229 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 SLCO6A1Q86UG4 719 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 XYLT1Q86Y38 959 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 DNAAF3Q8N9W5 541 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 CCNYQ8ND76 341 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 ZFP90Q8TF47 636 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 FAR2Q96K12 515 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 ABCB10Q9NRK6 738 aa13.23□□□□□ -0.29
GAPVD1-220ENST00000497580 PSME2Q9UL46 239 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms