RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CARD16Q5EG05 197 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 FAM102AQ5T9C2 384 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 IGF2-ASQ6U949 168 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 Q6ZSR6 202 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 BNIPLQ7Z465 357 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 DENND6BQ8NEG7 585 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 SLC39A7Q92504 469 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 WBP1Q96G27 269 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 CALN1Q9BXU9 219 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 ABCG4Q9H172 646 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 KALRNO60229 2985 aa17.18■□□□□ 0.34
TRAPPC3-207ENST00000497251 COL6A6A6NMZ7 2263 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 SPTY2D1-AS1A0A0U1RR47 76 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 TOR1BO14657 336 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 SMAD6O43541 496 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 ENDOD1O94919 500 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 CSF2P04141 144 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 NME1P15531 152 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 GGCXP38435 758 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 NUMBP49757 651 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 PCBP4P57723 403 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 GNA12Q03113 381 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 SGCGQ13326 291 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 VWA3BQ502W6 1294 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 CT47A1Q5JQC4 288 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 BROXQ5VW32 411 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZCCHC8Q6NZY4 707 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 GCNT7Q6ZNI0 430 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 TFAP2DQ7Z6R9 452 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 PARGQ86W56 976 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZNF677Q86XU0 584 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 XYLT1Q86Y38 959 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 WDR48Q8TAF3 677 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 BTN2A2Q8WVV5 523 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 APOLD1Q96LR9 279 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 TBATAQ96M53 351 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 FCRL3Q96P31 734 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 TBCBQ99426 244 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 SPON2Q9BUD6 331 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 ATP13A1Q9HD20 1204 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 MPP6Q9NZW5 540 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZNF212Q9UDV6 495 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 DACH1Q9UI36 760 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 SALL4Q9UJQ4 1053 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZFR2Q9UPR6 939 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 FADS3Q9Y5Q0 445 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 WASF2Q9Y6W5 498 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 TDRD6O60522 2096 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 DOCK4Q8N1I0 1966 aa17.17■□□□□ 0.34
TRAPPC3-207ENST00000497251 I6L893 689 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 K7ESM1 405 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 FPGTO14772 594 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZNF821O75541 412 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 GIMD1P0DJR0 217 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 ERCC5P28715 1186 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 MAPKAPK2P49137 400 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 CLDN6P56747 220 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 APBA1Q02410 837 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 TLE3Q04726 772 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 DRAP1Q14919 205 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 KDM7AQ6ZMT4 941 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 CHST14Q8NCH0 376 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 GRIN3AQ8TCU5 1115 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 BMFQ96LC9 184 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 C1QTNF2Q9BXJ5 285 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 OSBPL1AQ9BXW6 950 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 POLR1BQ9H9Y6 1135 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 ANLNQ9NQW6 1124 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 UCKL1Q9NWZ5 548 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 DNAJC28Q9NX36 388 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 IPO11Q9UI26 975 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 TMEM59LQ9UK28 342 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 HPCAL4Q9UM19 191 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 CA5BQ9Y2D0 317 aa17.16■□□□□ 0.34
TRAPPC3-207ENST00000497251 ZSCAN5CA6NGD5 496 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 SRGAP2O75044 1071 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 PAK4O96013 591 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 TFE3P19532 575 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 MLLT3P42568 568 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 PTK2BQ14289 1009 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 POLD3Q15054 466 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 CAMK4Q16566 473 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 SEL1L3Q68CR1 1132 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 LINGO4Q6UY18 593 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 PTAR1Q7Z6K3 402 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 SPACA3Q8IXA5 215 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 SLC22A18ASQ8N1D0 253 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 OR7D4Q8NG98 312 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 KLK6Q92876 244 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 GLMNQ92990 594 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 HIC2Q96JB3 615 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 TUBGCP2Q9BSJ2 902 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 C1QTNF7Q9BXJ2 289 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 STK33Q9BYT3 514 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 DPH1Q9BZG8 443 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 OSBPL2Q9H1P3 480 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 MAGEH1Q9H213 219 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 TNKS2Q9H2K2 1166 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 THSD1Q9NS62 852 aa17.15■□□□□ 0.34
TRAPPC3-207ENST00000497251 DAAM1Q9Y4D1 1078 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms