RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FAAH2Q6GMR7 532 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 SHC4Q6S5L8 630 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 RSRC2Q7L4I2 434 aaKnown RBP5.11□□□□□ -1.59
VPS36-206ENST00000497149 R3HCC1LQ7Z5L2 792 aaKnown RBP5.11□□□□□ -1.59
VPS36-206ENST00000497149 PIP4P1Q86T03 277 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 GPSM1Q86YR5 675 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 ZDHHC23Q8IYP9 409 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 OR4N2Q8NGD1 307 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 NFKBIDQ8NI38 313 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 TMEM174Q8WUU8 243 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 SKA1Q96BD8 255 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 ZHX3Q9H4I2 956 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 SMC4Q9NTJ3 1288 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 HEY2Q9UBP5 337 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 PNMA2Q9UL42 364 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 PCDHA12Q9UN75 941 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 COG5Q9UP83 839 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 RAP2CQ9Y3L5 183 aa5.11□□□□□ -1.59
VPS36-206ENST00000497149 WDR91A4D1P6 747 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 RTN3O95197 1032 aaPredicted RBP5.1□□□□□ -1.59
VPS36-206ENST00000497149 TBX18O95935 607 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 PRF1P14222 555 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 SRSF1Q07955 248 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS36-206ENST00000497149 RALBP1Q15311 655 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 INPP5JQ15735 1006 aaPredicted RBP5.1□□□□□ -1.59
VPS36-206ENST00000497149 EDRF1Q3B7T1 1238 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 INO80CQ6PI98 192 aaPredicted RBP5.1□□□□□ -1.59
VPS36-206ENST00000497149 MOB3CQ70IA8 216 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 SERPINA11Q86U17 422 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 CHD1LQ86WJ1 897 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 FAM217AQ8IXS0 508 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 NANOGP1Q8N7R0 232 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 LRRC57Q8N9N7 239 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 KDM1BQ8NB78 822 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 MPLKIPQ8TAP9 179 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 GDPD5Q8WTR4 605 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 HDAC2Q92769 488 aaKnown RBP5.1□□□□□ -1.59
VPS36-206ENST00000497149 RPL36ALQ969Q0 106 aaKnown RBP5.1□□□□□ -1.59
VPS36-206ENST00000497149 KIF1BPQ96EK5 621 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 B3GNT4Q9C0J1 378 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 USP44Q9H0E7 712 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 BABAM1Q9NWV8 329 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 KCND2Q9NZV8 630 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 PCDHGB5Q9Y5G0 923 aa5.1□□□□□ -1.59
VPS36-206ENST00000497149 COL3A1P02461 1466 aaPredicted RBP5.09□□□□□ -1.59
VPS36-206ENST00000497149 ADGRF5Q8IZF2 1346 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.09□□□□□ -1.59
VPS36-206ENST00000497149 A0A1W2PPH5 198 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 HSPB6O14558 160 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 EPHA8P29322 1005 aaPredicted RBP5.09□□□□□ -1.59
VPS36-206ENST00000497149 SLC18A2Q05940 514 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 KLF9Q13886 244 aaPredicted RBP5.09□□□□□ -1.59
VPS36-206ENST00000497149 SIM2Q14190 667 aaPredicted RBP5.09□□□□□ -1.59
VPS36-206ENST00000497149 RABEP1Q15276 862 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 SLC9B1Q4ZJI4 515 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 PXDC1Q5TGL8 231 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 TMEM81Q6P7N7 255 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 FAM83HQ6ZRV2 1179 aaPredicted RBP5.09□□□□□ -1.59
VPS36-206ENST00000497149 FAM160B2Q86V87 743 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 ZNF575Q86XF7 245 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 TMC8Q8IU68 726 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 C11orf65Q8NCR3 313 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 DENND1AQ8TEH3 1009 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 TMEM170AQ8WVE7 144 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 ATOH1Q92858 354 aaPredicted RBP5.09□□□□□ -1.59
VPS36-206ENST00000497149 ZNF333Q96JL9 665 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 C7orf26Q96N11 449 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 TMEM79Q9BSE2 394 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 SPRTNQ9H040 489 aaPredicted RBP5.09□□□□□ -1.59
VPS36-206ENST00000497149 SLC25A18Q9H1K4 315 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 TASP1Q9H6P5 420 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 MAP6D1Q9H9H5 199 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 SEL1LQ9UBV2 794 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 SARDHQ9UL12 918 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 CAMK2AQ9UQM7 478 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 HS3ST3B1Q9Y662 390 aa5.09□□□□□ -1.59
VPS36-206ENST00000497149 KDM3AQ9Y4C1 1321 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 TEX13CA0A0J9YWL9 993 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 A0A1W2PQM1 296 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 DNAJC9-AS1A6NH13 148 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 TNFSF14O43557 240 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 TMEM63AO94886 807 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 NDUFB8O95169 186 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 IFNA2P01563 188 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 GALTP07902 379 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 UBL4AP11441 157 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 ME1P48163 572 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 ALDH7A1P49419 539 aaKnown RBP5.08□□□□□ -1.6
VPS36-206ENST00000497149 CENPAP49450 140 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 CCR9P51686 369 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 MAPRE1Q15691 268 aaKnown RBP5.08□□□□□ -1.6
VPS36-206ENST00000497149 TSTQ16762 297 aaKnown RBP5.08□□□□□ -1.6
VPS36-206ENST00000497149 MANEAQ5SRI9 462 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 FAM180BQ6P0A1 224 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 DSTYKQ6XUX3 929 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 C1orf122Q6ZSJ8 110 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 RRM2BQ7LG56 351 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 MRPL10Q7Z7H8 261 aaKnown RBP5.08□□□□□ -1.6
VPS36-206ENST00000497149 TADA2BQ86TJ2 420 aa5.08□□□□□ -1.6
VPS36-206ENST00000497149 ARFGAP1Q8N6T3 406 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms