RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 TXLNGQ9NUQ3 528 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 HIF1ANQ9NWT6 349 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 GRHL1Q9NZI5 618 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 NLKQ9UBE8 527 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 HDAC6Q9UBN7 1215 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 SEL1LQ9UBV2 794 aa4.04□□□□□ -1.76
CD46-218ENST00000496723 A0A1B0GVT2 93 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 OR6C75A6NL08 312 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 INAFM1C9JVW0 142 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 RGS14O43566 566 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 IL1AP01583 271 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 LCATP04180 440 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 MYZAPP0CAP1 466 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 CD72P21854 359 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 YWHAQP27348 245 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 HNF1BP35680 557 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 MLH1P40692 756 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 PMS2P54278 862 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 ZP1P60852 638 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 ZXDBP98169 803 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 PPFIA1Q13136 1202 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 ANKRD1Q15327 319 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 ZNF585BQ52M93 769 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 TBC1D9BQ66K14 1250 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 ZDHHC23Q8IYP9 409 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 FBXL14Q8N1E6 418 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 ZBTB8BQ8NAP8 495 aaPredicted RBP4.03□□□□□ -1.76
CD46-218ENST00000496723 SETD9Q8NE22 299 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 APOLD1Q96LR9 279 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 NTPCRQ9BSD7 190 aaKnown RBP4.03□□□□□ -1.76
CD46-218ENST00000496723 STN1Q9H668 368 aaKnown RBP4.03□□□□□ -1.76
CD46-218ENST00000496723 PLK2Q9NYY3 685 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 FBXO40Q9UH90 709 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 SUFUQ9UMX1 484 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 PCDHA7Q9UN72 937 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 GDAQ9Y2T3 454 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 GPR52Q9Y2T5 361 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 PTGDR2Q9Y5Y4 395 aa4.03□□□□□ -1.76
CD46-218ENST00000496723 VWA3AA6NCI4 1184 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 ERVV-2B6SEH9 535 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 MS4A18H0YCH9 400 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 PEX12O00623 359 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 KLK10O43240 276 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 SPRY3O43610 288 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 LIASO43766 372 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 KIF1CO43896 1103 aaKnown RBP4.02□□□□□ -1.77
CD46-218ENST00000496723 CNPP09543 421 aaKnown RBP4.02□□□□□ -1.77
CD46-218ENST00000496723 WEE2P0C1S8 567 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 ENO3P13929 434 aaPredicted RBP4.02□□□□□ -1.77
CD46-218ENST00000496723 CDH12P55289 794 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 GPS2Q13227 327 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 SLC12A1Q13621 1099 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 EFR3AQ14156 821 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 FBXO43Q4G163 708 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 ZNF628Q5EBL2 1059 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 DNTTIP2Q5QJE6 756 aaKnown RBP4.02□□□□□ -1.77
CD46-218ENST00000496723 FNBP1LQ5T0N5 605 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 NAPEPLDQ6IQ20 393 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 Q6ZSV7 163 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 TRILQ7L0X0 811 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 ZNF367Q7RTV3 350 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 GHDCQ8N2G8 530 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 SLC35F5Q8WV83 523 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 STAMQ92783 540 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 ATOH1Q92858 354 aaPredicted RBP4.02□□□□□ -1.77
CD46-218ENST00000496723 MIB2Q96AX9 1013 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 ZNF479Q96JC4 524 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 FAM84BQ96KN1 310 aaPredicted RBP4.02□□□□□ -1.77
CD46-218ENST00000496723 ZSCAN31Q96LW9 406 aaPredicted RBP4.02□□□□□ -1.77
CD46-218ENST00000496723 TWNKQ96RR1 684 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 DCLK3Q9C098 648 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 LHPPQ9H008 270 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 TTC12Q9H892 705 aaPredicted RBP4.02□□□□□ -1.77
CD46-218ENST00000496723 ATP8A2Q9NTI2 1148 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.02□□□□□ -1.77
CD46-218ENST00000496723 FZD10Q9ULW2 581 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 MYO6Q9UM54 1294 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 EVPLQ92817 2033 aa4.02□□□□□ -1.77
CD46-218ENST00000496723 CYSRT1A8MQ03 144 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 FAM157AC9JC47 383 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 EYA2O00167 538 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 VWA5AO00534 786 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 LDB2O43679 373 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 CLDN7O95471 211 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 NGFRP08138 427 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 MMP3P08254 477 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 HOXD3P31249 432 aaPredicted RBP4.01□□□□□ -1.77
CD46-218ENST00000496723 ASIC2Q16515 512 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 RPE65Q16518 533 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 ME3Q16798 604 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 INO80DQ53TQ3 878 aaPredicted RBP4.01□□□□□ -1.77
CD46-218ENST00000496723 FSCBQ5H9T9 825 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.01□□□□□ -1.77
CD46-218ENST00000496723 PALB2Q86YC2 1186 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 TMC8Q8IU68 726 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 USP38Q8NB14 1042 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 DNAAF1Q8NEP3 725 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 RASSF8Q8NHQ8 419 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 SH3KBP1Q96B97 665 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms