RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SF3A2Q15428 464 aaKnown RBP17.43■□□□□ 0.38
SNX17-209ENST00000494893 CYTH1Q15438 398 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 CSRP2Q16527 193 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 POM121L1PQ3SYA9 428 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 CARD16Q5EG05 197 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 LYSMD4Q5XG99 296 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 TCEAL6Q6IPX3 200 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 NYAP1Q6ZVC0 841 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 CYP2U1Q7Z449 544 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 KIAA2013Q8IYS2 634 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 HDDC3Q8N4P3 179 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 RNF10Q8N5U6 811 aaKnown RBP17.43■□□□□ 0.38
SNX17-209ENST00000494893 PCDH19Q8TAB3 1148 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 TCEAL3Q969E4 200 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 ARRDC3Q96B67 414 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 FAF2Q96CS3 445 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 RCOR3Q9P2K3 495 aaPredicted RBP17.43■□□□□ 0.38
SNX17-209ENST00000494893 LHX3Q9UBR4 397 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 PILRBQ9UKJ0 227 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 HPCAL4Q9UM19 191 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 SLCO1B1Q9Y6L6 691 aa17.43■□□□□ 0.38
SNX17-209ENST00000494893 DMXL1Q9Y485 3027 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 ZSCAN5CA6NGD5 496 aaPredicted RBP17.42■□□□□ 0.38
SNX17-209ENST00000494893 C3orf70A6NLC5 250 aaPredicted RBP17.42■□□□□ 0.38
SNX17-209ENST00000494893 NDUFS2O75306 463 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 RNASEH2AO75792 299 aaKnown RBP17.42■□□□□ 0.38
SNX17-209ENST00000494893 ZNF806P0C7X5 589 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 COMTP21964 271 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 MAOBP27338 520 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 GKP32189 559 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 CCNHP51946 323 aaPredicted RBP17.42■□□□□ 0.38
SNX17-209ENST00000494893 GEMIN4P57678 1058 aaKnown RBP17.42■□□□□ 0.38
SNX17-209ENST00000494893 CNTN1Q12860 1018 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 KRT81Q14533 505 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 INO80DQ53TQ3 878 aaPredicted RBP17.42■□□□□ 0.38
SNX17-209ENST00000494893 ATXN7L2Q5T6C5 722 aaPredicted RBP17.42■□□□□ 0.38
SNX17-209ENST00000494893 ZNF354CQ86Y25 554 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 PLPP6Q8IY26 295 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 PQLC3Q8N755 202 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 CADM4Q8NFZ8 388 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 OR6K2Q8NGY2 324 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 PIGKQ92643 395 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 BTBD1Q9H0C5 482 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 RXFP3Q9NSD7 469 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 DONSONQ9NYP3 566 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 FZD4Q9ULV1 537 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.42■□□□□ 0.38
SNX17-209ENST00000494893 NUMA1Q14980 2115 aa17.42■□□□□ 0.38
SNX17-209ENST00000494893 MACROD2A1Z1Q3 448 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 ARHGAP42A6NI28 874 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 METTL12A8MUP2 240 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 DFFAO00273 331 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 KIF5CO60282 957 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 LEFTY1O75610 366 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 SEMA4FO95754 770 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 PEX11BO96011 259 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 GSRP00390 522 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 KRT7P08729 469 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 KDELR1P24390 212 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 DNA2P51530 1060 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 PDK2Q15119 407 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 ARSIQ5FYB1 569 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 AGBL4Q5VU57 503 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 DCAF12L1Q5VU92 463 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 NCBP2-AS2Q69YL0 99 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 TMCO3Q6UWJ1 677 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 DSG4Q86SJ6 1040 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 LZTR1Q8N653 840 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 KCTD6Q8NC69 237 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 TMIEQ8NEW7 156 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 GRIN3AQ8TCU5 1115 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 GANCQ8TET4 914 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 DNASE2BQ8WZ79 361 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 OMDQ99983 421 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 ORAI3Q9BRQ5 295 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 ZNF670Q9BS34 389 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 CALN1Q9BXU9 219 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 SGK2Q9HBY8 427 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 VPS45Q9NRW7 570 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 HECAQ9UBI9 543 aaPredicted RBP17.41■□□□□ 0.38
SNX17-209ENST00000494893 UBA2Q9UBT2 640 aaPredicted RBP17.41■□□□□ 0.38
SNX17-209ENST00000494893 IL36AQ9UHA7 158 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 NCKAP1Q9Y2A7 1128 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 ALG6Q9Y672 507 aa17.41■□□□□ 0.38
SNX17-209ENST00000494893 PTPRZ1P23471 2315 aaPredicted RBP17.41■□□□□ 0.38
SNX17-209ENST00000494893 LAMA1P25391 3075 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 MFSD11O43934 449 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 IGHV4-34P06331 123 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 SLC1A1P43005 524 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 NOP2P46087 812 aaKnown RBP17.4■□□□□ 0.38
SNX17-209ENST00000494893 RGRP47804 291 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 ADPRHP54922 357 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 TAS2R38P59533 333 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 PIP5KL1Q5T9C9 394 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 LRRC38Q5VT99 294 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 FAM46CQ5VWP2 391 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 NCEH1Q6PIU2 408 aa17.4■□□□□ 0.38
SNX17-209ENST00000494893 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.4■□□□□ 0.38
SNX17-209ENST00000494893 PRR23CQ6ZRP0 262 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms