RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 NAT2P11245 290 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 HSD17B1P14061 328 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ALDH7A1P49419 539 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF132P52740 706 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MYL6P60660 151 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 CACNB1Q02641 598 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PRKCDQ05655 676 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 CHRNDQ07001 517 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 BNIP2Q12982 314 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MTMR2Q13614 643 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 DGUOKQ16854 277 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SPDYE2Q495Y8 402 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SAMD4BQ5PRF9 694 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TRAPPC3LQ5T215 181 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PMF1Q6P1K2 205 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 NSMFQ6X4W1 530 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ILDR2Q71H61 639 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 UBE2Q1Q7Z7E8 422 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 C14orf80Q86SX3 495 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SLC22A16Q86VW1 577 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 NDUFAF2Q8N183 169 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 BEND7Q8N7W2 519 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ROPN1LQ96C74 230 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ELMO2Q96JJ3 720 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 CEP170P1Q96L14 293 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MYRFLQ96LU7 910 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 VPS35Q96QK1 796 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 KIFC1Q9BW19 673 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TRIM15Q9C019 465 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MTMR12Q9C0I1 747 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 LHPPQ9H008 270 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TLR9Q9NR96 1032 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 INTS10Q9NVR2 710 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PNPOQ9NVS9 261 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SEPT10Q9P0V9 454 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MID2Q9UJV3 735 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 USP22Q9UPT9 525 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TRAPPC4Q9Y296 219 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TLR6Q9Y2C9 796 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SLC27A5Q9Y2P5 690 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 RAP2CQ9Y3L5 183 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 KLF2Q9Y5W3 355 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PMF1-BGLAPU3KQ54 211 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 HEATR9A2RTY3 570 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PABPN1LA6NDY0 278 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SOWAHBA6NEL2 793 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 CXorf49A8MYA2 514 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SNPHO15079 494 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 HDAC3O15379 428 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 FAM13AO94988 1023 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 CSH1P0DML2 217 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 CSH2P0DML3 217 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MLNP12872 115 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 CRHBPP24387 322 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 QARSP47897 775 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF135P52742 658 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 GTF2BQ00403 316 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SLC25A11Q02978 314 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 INCA1Q0VD86 236 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SEMA3BQ13214 749 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 NME3Q13232 169 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PDE1CQ14123 709 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 NRF1Q16656 503 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 AOC3Q16853 763 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SLC9B1Q4ZJI4 515 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 COQ5Q5HYK3 327 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TIGD3Q6B0B8 471 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ZCCHC8Q6NZY4 707 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PNCKQ6P2M8 343 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PRMT9Q6P2P2 845 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SPATC1Q76KD6 591 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 NIPA1Q7RTP0 329 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 RALGPS2Q86X27 583 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 UBQLNLQ8IYU4 475 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 TBC1D21Q8IYX1 336 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 URGCPQ8TCY9 931 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 RCN3Q96D15 328 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF560Q96MR9 790 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 NT5C1BQ96P26 610 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MCMBPQ9BTE3 642 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MUC3BQ9H195 1237 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 VPS33BQ9H267 617 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SMPD3Q9NY59 655 aaPredicted RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PAK5Q9P286 719 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 EIF3KQ9UBQ5 218 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF221Q9UK13 617 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 RBMX2Q9Y388 322 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 STRCQ7RTU9 1775 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SLC15A5A6NIM6 579 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SNTNA6NMZ2 147 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 SGK1O00141 431 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 PHGDHO43175 533 aaKnown RBP4.86□□□□□ -1.63
PRKD3-210ENST00000494667 KRT1P04264 644 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 APOA4P06727 396 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 GNAO1P09471 354 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 UMPSP11172 480 aa4.86□□□□□ -1.63
PRKD3-210ENST00000494667 MX2P20592 715 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms