RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LRRC73Q5JTD7 316 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 RNF10Q8N5U6 811 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 AADATQ8N5Z0 425 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 LZTR1Q8N653 840 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 KDM1BQ8NB78 822 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 PIP4K2CQ8TBX8 421 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 OR8D1Q8WZ84 308 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 C10orf88Q9H8K7 445 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 MBD1Q9UIS9 605 aaPredicted RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 hCG_1818297A0A087WSY0 165 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 IGHV1OR15-9A0A0B4J2B8 117 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 TARSL2A2RTX5 802 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 KCNK1O00180 336 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 ENC1O14682 589 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 MCF2LO15068 1137 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 DDX3YO15523 660 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 PIGNO95427 931 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 CTNNA2P26232 953 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 CHRNA3P32297 505 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 ACSL1P33121 698 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 P2RY2P41231 377 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 GARSP41250 739 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 CLCN6P51797 869 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 RPL6Q02878 288 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 AP1B1Q10567 949 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 E2F5Q15329 346 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 MAP7D1Q3KQU3 841 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 CARD16Q5EG05 197 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 SLC9A4Q6AI14 798 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 ADAT2Q7Z6V5 191 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 ZC3H18Q86VM9 953 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 RCOR2Q8IZ40 523 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 HDDC3Q8N4P3 179 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 OR2AP1Q8NGE2 309 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 EXD1Q8NHP7 514 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 GAB3Q8WWW8 586 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 TOE1Q96GM8 510 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 RBM41Q96IZ5 413 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 CINPQ9BW66 212 aaPredicted RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 FAM126AQ9BYI3 521 aaPredicted RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 FBXL12Q9NXK8 326 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 SEPT10Q9P0V9 454 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 IL36AQ9UHA7 158 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.31□□□□□ -0.6
APTX-230ENST00000494649 ATXN2Q99700 1313 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 GPR179Q6PRD1 2367 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 HOXA6P31267 233 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 GEMIN4P57678 1058 aaKnown RBP11.3□□□□□ -0.6
APTX-230ENST00000494649 IL10RBQ08334 325 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 SLC20A2Q08357 652 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 GALNT2Q10471 571 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 LBRQ14739 615 aaKnown RBP11.3□□□□□ -0.6
APTX-230ENST00000494649 CCDC181Q5TID7 509 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.3□□□□□ -0.6
APTX-230ENST00000494649 ALYREFQ86V81 257 aaKnown RBP11.3□□□□□ -0.6
APTX-230ENST00000494649 REXO1L1PQ8IX06 675 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 PCDH20Q8N6Y1 951 aaKnown RBP11.3□□□□□ -0.6
APTX-230ENST00000494649 UBL4BQ8N7F7 174 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 SPACA7Q96KW9 195 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 ALS2CR12Q96Q35 445 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 OMDQ99983 421 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 GPR174Q9BXC1 333 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 NEUROG2Q9H2A3 272 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 LHX3Q9UBR4 397 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 PPM1HQ9ULR3 514 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
APTX-230ENST00000494649 GON4LQ3T8J9 2241 aa11.3□□□□□ -0.6
APTX-230ENST00000494649 ZSCAN5CA6NGD5 496 aaPredicted RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 F5H423 210 aaPredicted RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 LILRB5O75023 590 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 PEX11BO96011 259 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 UGT2B4P06133 528 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 HOXD11P31277 338 aaPredicted RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 CXCR5P32302 372 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 PTGER3P43115 390 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 SCNN1BP51168 640 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 SNRPD1P62314 119 aaKnown RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 ITKQ08881 620 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 ZNF235Q14590 738 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 KCTD19Q17RG1 926 aaPredicted RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 PGBD5Q8N414 524 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 HES6Q96HZ4 224 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 CCDC114Q96M63 670 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 OSBPL8Q9BZF1 889 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 CEP44Q9C0F1 390 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 PABPC3Q9H361 631 aaKnown RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 NT5MQ9NPB1 228 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 ITM2CQ9NQX7 267 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 USP36Q9P275 1121 aaKnown RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 WASF2Q9Y6W5 498 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 CCDC163A0A0D9SF12 145 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 TCRBV7S2A1N4TA0A589 114 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 MAOBP27338 520 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 DRD3P35462 400 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 DHPSP49366 369 aaPredicted RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 SEMG2Q02383 582 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 CNTN1Q12860 1018 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms