RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 LRRC8CQ8TDW0 803 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 ADAMTS19Q8TE59 1207 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 PTPRN2Q92932 1015 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 CYP2S1Q96SQ9 504 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 PITPNM3Q9BZ71 974 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 SLC13A1Q9BZW2 595 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 MAGEH1Q9H213 219 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 PCMTD2Q9NV79 361 aa16.77■□□□□ 0.28
ATG4B-225ENST00000494465 TTC24A2A3L6 582 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-225ENST00000494465 CCDC78A2IDD5 438 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 WDR91A4D1P6 747 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 MUSKO15146 869 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 EDF1O60869 148 aaKnown RBP16.77■□□□□ 0.27
ATG4B-225ENST00000494465 TOP3BO95985 862 aaKnown RBP16.77■□□□□ 0.27
ATG4B-225ENST00000494465 F7P08709 466 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-225ENST00000494465 IRF1P10914 325 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 CRHR1P34998 444 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 ZXDBP98169 803 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 GNA12Q03113 381 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 MSLNQ13421 630 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-225ENST00000494465 PCSK7Q16549 785 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 RABGAP1LQ5R372 815 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 GRTP1Q5TC63 336 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 NDUFAF2Q8N183 169 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 OR7D4Q8NG98 312 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 RBBP8Q99708 897 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 VPS45Q9NRW7 570 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 C20orf96Q9NUD7 363 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-225ENST00000494465 PRKAG3Q9UGI9 489 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 STOML2Q9UJZ1 356 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 PHTF1Q9UMS5 762 aa16.77■□□□□ 0.27
ATG4B-225ENST00000494465 USP15Q9Y4E8 981 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-225ENST00000494465 TPP1O14773 563 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 GREM1O60565 184 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 GJB3O75712 270 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 OLFM2O95897 454 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 FGBP02675 491 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 ETFBP38117 255 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 CREMQ03060 361 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 ITKQ08881 620 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 TMCO4Q5TGY1 634 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 LILRA6Q6PI73 481 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 SPATA21Q7Z572 469 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 ACMSDQ8TDX5 336 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 NSMCE1Q8WV22 266 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 MRM3Q9HC36 420 aaKnown RBP16.76■□□□□ 0.27
ATG4B-225ENST00000494465 ALG13Q9NP73 1137 aaKnown RBP16.76■□□□□ 0.27
ATG4B-225ENST00000494465 SMPD4Q9NXE4 827 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 STK39Q9UEW8 545 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 TCAF1Q9Y4C2 921 aa16.76■□□□□ 0.27
ATG4B-225ENST00000494465 CLDN11O75508 207 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ARNTP27540 789 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 PDE1CQ14123 709 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-225ENST00000494465 STRA8Q7Z7C7 330 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ANKS4BQ8N8V4 417 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 PTCD2Q8WV60 388 aaKnown RBP16.75■□□□□ 0.27
ATG4B-225ENST00000494465 BADQ92934 168 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ATP2A3Q93084 1043 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ISL2Q96A47 359 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 STARD13Q9Y3M8 1113 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ACTL7AQ9Y615 435 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 GOLGA8TH3BQL2 631 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 MBL2P11226 248 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-225ENST00000494465 MAGEA12P43365 314 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ARCN1P48444 511 aaKnown RBP16.75■□□□□ 0.27
ATG4B-225ENST00000494465 SERPINB4P48594 390 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 LIMK2P53671 638 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 CORO7P57737 925 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 PPIGQ13427 754 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■□□□ 12.5
ATG4B-225ENST00000494465 TXNDC8Q6A555 127 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ESRP1Q6NXG1 681 aaKnown RBP16.75■□□□□ 0.27
ATG4B-225ENST00000494465 CHST9Q7L1S5 443 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ITIH5Q86UX2 942 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 CCT6BQ92526 530 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 GRAMD1AQ96CP6 724 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 ZNF599Q96NL3 588 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 LRRC3Q9BY71 257 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 IARS2Q9NSE4 1012 aaKnown RBP16.75■□□□□ 0.27
ATG4B-225ENST00000494465 TREX1Q9NSU2 369 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 TXNDC16Q9P2K2 825 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 SLC2A6Q9UGQ3 507 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 INSL6Q9Y581 213 aa16.75■□□□□ 0.27
ATG4B-225ENST00000494465 SPRED3Q2MJR0 410 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 PDPK2PQ6A1A2 396 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 ALG1LQ6GMV1 187 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 GAREM2Q75VX8 874 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 TMC8Q8IU68 726 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 SLC25A41Q8N5S1 370 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 PPHLN1Q8NEY8 458 aaKnown RBP16.74■□□□□ 0.27
ATG4B-225ENST00000494465 ZMYND15Q9H091 742 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 IQCGQ9H095 443 aaKnown RBP16.74■□□□□ 0.27
ATG4B-225ENST00000494465 MANSC1Q9H8J5 431 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 TRPC7Q9HCX4 862 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 TBC1D30Q9Y2I9 924 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 A0A1B0GVM2 712 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 TCAF2A6NFQ2 919 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 NRG2O14511 850 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-225ENST00000494465 TSPAN3O60637 253 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms