RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SLC25A13Q9UJS0 675 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 GMEB2Q9UKD1 530 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 INTUQ9ULD6 942 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 CYP8B1Q9UNU6 501 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 PCDHGA5Q9Y5G8 931 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 ACTL7AQ9Y615 435 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 PI4KAP42356 2102 aa8.96□□□□□ -0.98
ITGB1-217ENST00000494395 PCDH15Q96QU1 1955 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 GON4LQ3T8J9 2241 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 K7ERQ8 282 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 MYO1FO00160 1098 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 CDK2AP1O14519 115 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 FGF10O15520 208 aaPredicted RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 SMAD6O43541 496 aaKnown RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 RHOBTB1O94844 696 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 PROSCO94903 275 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 RARAP10276 462 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 GOT1P17174 413 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 CD6P30203 668 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 ETFBP38117 255 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 PTGER3P43115 390 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 HCAR3P49019 387 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 SERPINH1P50454 418 aaKnown RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 ARSEP51690 589 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 ZNF135P52742 658 aaPredicted RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 METAP1P53582 386 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 TPI1P60174 286 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 SERINC3Q13530 473 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 ELAVL3Q14576 367 aaKnown RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 NAA30Q147X3 362 aaPredicted RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 CST6Q15828 149 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 AFMIDQ63HM1 303 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 C22orf39Q6P5X5 142 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 LINGO4Q6UY18 593 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 SLC36A4Q6YBV0 504 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 RFX8Q6ZV50 586 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 LPCAT2Q7L5N7 544 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 POLNQ7Z5Q5 900 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 CACUL1Q86Y37 369 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 ARHGAP12Q8IWW6 846 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 TMEFF1Q8IYR6 380 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 STK40Q8N2I9 435 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 RFFLQ8WZ73 363 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 ZNF419Q96HQ0 510 aaPredicted RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 DHX35Q9H5Z1 703 aaKnown RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 LRRC19Q9H756 370 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 CATSPERBQ9H7T0 1116 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 ATP13A1Q9HD20 1204 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 CWC15Q9P013 229 aaKnown RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 CTTNBP2NLQ9P2B4 639 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 SERGEFQ9UGK8 458 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 DNMT3AQ9Y6K1 912 aaPredicted RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 PTPRZ1P23471 2315 aaPredicted RBP8.95□□□□□ -0.98
ITGB1-217ENST00000494395 DMXL1Q9Y485 3027 aa8.95□□□□□ -0.98
ITGB1-217ENST00000494395 PLXNA2O75051 1894 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 DOCK9Q9BZ29 2069 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 RASA4BC9J798 803 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 RNF103O00237 685 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 CBX4O00257 560 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 EEF2KO00418 725 aaKnown RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 MCF2LO15068 1137 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 ALOX15BO15296 676 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 MID1O15344 667 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 RASA4O43374 803 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 RAMP2O60895 175 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 CTSLP07711 333 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 ERCC2P18074 760 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 ACSL1P33121 698 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 MAN1A1P33908 653 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 DRD3P35462 400 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 MPLP40238 635 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 NNMTP40261 264 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 HADHBP55084 474 aaKnown RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 YBEYP58557 167 aaPredicted RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 TAS2R40P59535 323 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 PSMA6P60900 246 aaKnown RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 SLC20A2Q08357 652 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 SPEM2Q0P670 501 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 POLD3Q15054 466 aaPredicted RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 SMTNL2Q2TAL5 461 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 BOLA3Q53S33 107 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 KCNT1Q5JUK3 1230 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 USP30Q70CQ3 517 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 MMAAQ8IVH4 418 aaKnown RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 RHOT2Q8IXI1 618 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 CCDC170Q8IYT3 715 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 AADATQ8N5Z0 425 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 NPWQ8N729 165 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 OR2A12Q8NGT7 310 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 SLC35G2Q8TBE7 412 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 ISG20Q96AZ6 181 aaKnown RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 HMCESQ96FZ2 354 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 TOE1Q96GM8 510 aaKnown RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 SPON2Q9BUD6 331 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 CEP44Q9C0F1 390 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 ARRDC1-AS1Q9H2J1 176 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 PABPC3Q9H361 631 aaKnown RBP8.94□□□□□ -0.98
ITGB1-217ENST00000494395 ZWILCHQ9H900 591 aa8.94□□□□□ -0.98
ITGB1-217ENST00000494395 PDFQ9HBH1 243 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms