RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZNF189O75820 626 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-223ENST00000494123 PEX11BO96011 259 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 COL9A1P20849 921 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 HSPA9P38646 679 aaKnown RBP14.8□□□□□ -0.04
BRCA1-223ENST00000494123 CAMK2GQ13555 558 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-223ENST00000494123 CARD16Q5EG05 197 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 KIAA1211LQ6NV74 962 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 TMEM92Q6UXU6 159 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 TSTD1Q8NFU3 115 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 ACTRT1Q8TDG2 376 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 C1orf54Q8WWF1 131 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 HTR3CQ8WXA8 447 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 ATG4AQ8WYN0 398 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 OR8D1Q8WZ84 308 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 MAML1Q92585 1016 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 EXOC2Q96KP1 924 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 GDAP1L1Q96MZ0 367 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 FBRSQ9HAH7 460 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 NT5MQ9NPB1 228 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 PRSS16Q9NQE7 514 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 RBM22Q9NW64 420 aaKnown RBP eCLIP14.8□□□□□ -0.04
BRCA1-223ENST00000494123 TTLL3Q9Y4R7 772 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 ZDBF2Q9HCK1 2354 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 GOLGA6L10A0A0M3HER8 536 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 DLL1O00548 723 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 LAMTOR5O43504 91 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 ALDH1A2O94788 518 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 STK10O94804 968 aaKnown RBP14.79□□□□□ -0.04
BRCA1-223ENST00000494123 GSRP00390 522 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 AVPR2P30518 371 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 IFI35P80217 286 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-223ENST00000494123 SATB1Q01826 763 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 ITKQ08881 620 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 ELAVL3Q14576 367 aaKnown RBP14.79□□□□□ -0.04
BRCA1-223ENST00000494123 ATXN7L2Q5T6C5 722 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-223ENST00000494123 C9orf64Q5T6V5 341 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 DSG4Q86SJ6 1040 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 DTWD2Q8NBA8 298 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 TSEN2Q8NCE0 465 aaKnown RBP14.79□□□□□ -0.04
BRCA1-223ENST00000494123 OR2AP1Q8NGE2 309 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 OR2T3Q8NH03 318 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 PSKH2Q96QS6 385 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 HHIPQ96QV1 700 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 HOMER3Q9NSC5 361 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 C2orf42Q9NWW7 574 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 SMARCAL1Q9NZC9 954 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 BCCIPQ9P287 314 aaKnown RBP eCLIP14.79□□□□□ -0.04
BRCA1-223ENST00000494123 HECAQ9UBI9 543 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-223ENST00000494123 LHX3Q9UBR4 397 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 CUL9Q8IWT3 2517 aa14.79□□□□□ -0.04
BRCA1-223ENST00000494123 KCNN4O15554 427 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 LIASO43766 372 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 ZNF821O75541 412 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-223ENST00000494123 JCHAINP01591 159 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 RBL1P28749 1068 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 PAFAH1B1P43034 410 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 CCNHP51946 323 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-223ENST00000494123 RAD51Q06609 339 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 SNX1Q13596 522 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 BYSLQ13895 437 aaKnown RBP14.78□□□□□ -0.04
BRCA1-223ENST00000494123 MAMSTRQ6ZN01 415 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 DPY19L3Q6ZPD9 716 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 STK40Q8N2I9 435 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 PGBD3Q8N328 593 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 TEX26Q8N6G2 289 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 OR2A12Q8NGT7 310 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 SLC35B2Q8TB61 432 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 HMGB4Q8WW32 186 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 AP1M1Q9BXS5 423 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 CEP41Q9BYV8 373 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 ZDHHC6Q9H6R6 413 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 C10orf88Q9H8K7 445 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 AMACRQ9UHK6 382 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 DNPEPQ9ULA0 475 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 ZNF148Q9UQR1 794 aa14.78□□□□□ -0.04
BRCA1-223ENST00000494123 BCLAF3A2AJT9 711 aaKnown RBP14.77□□□□□ -0.04
BRCA1-223ENST00000494123 KRIT1O00522 736 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 ALOX15BO15296 676 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 SCNN1BP51168 640 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 ZBTB17Q13105 803 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 SIX1Q15475 284 aaPredicted RBP14.77□□□□□ -0.04
BRCA1-223ENST00000494123 CCNG2Q16589 344 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 ANO7Q6IWH7 933 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 CACUL1Q86Y37 369 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 C1orf210Q8IVY1 113 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 PLPP6Q8IY26 295 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 CAMKK1Q8N5S9 505 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 OR6K2Q8NGY2 324 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 GRIN3AQ8TCU5 1115 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 VAT1Q99536 393 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 IL12RB2Q99665 862 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 HEPHQ9BQS7 1158 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 POLR1EQ9GZS1 481 aaKnown RBP14.77□□□□□ -0.04
BRCA1-223ENST00000494123 KLHL8Q9P2G9 620 aaPredicted RBP14.77□□□□□ -0.04
BRCA1-223ENST00000494123 RNF14Q9UBS8 474 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 IL36AQ9UHA7 158 aa14.77□□□□□ -0.04
BRCA1-223ENST00000494123 KMT2EQ8IZD2 1858 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 CFAP69A5D8W1 941 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 RNF103O00237 685 aa14.77□□□□□ -0.05
BRCA1-223ENST00000494123 APBB3O95704 486 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms