RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 NEXN-AS1Q8NBZ9 246 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 LRRC8CQ8TDW0 803 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 MUL1Q969V5 352 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 FBXO17Q96EF6 278 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 BICD1Q96G01 975 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 BRD8Q9H0E9 1235 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 TMEM248Q9NWD8 314 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 TAGLN3Q9UI15 199 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 NFS1Q9Y697 457 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 COMMD10Q9Y6G5 202 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 ABHD14A-ACY1A0A1B0GW23 586 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 MAGEA13PA6NCF6 341 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 TMEM247A6NEH6 219 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 MBD3L5A6NJ08 208 aaPredicted RBP4.4□□□□□ -1.71
SMC4-223ENST00000493695 RNMTO43148 476 aaKnown RBP4.4□□□□□ -1.71
SMC4-223ENST00000493695 SETSIPP0DME0 302 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 NPPBP16860 134 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 DGKAP23743 735 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 PHEXP78562 749 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 CTTNQ14247 550 aaKnown RBP4.4□□□□□ -1.71
SMC4-223ENST00000493695 BRD3Q15059 726 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 MTFR2Q6P444 385 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 DBF4BQ8NFT6 615 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 CTCFLQ8NI51 663 aaPredicted RBP4.4□□□□□ -1.71
SMC4-223ENST00000493695 TMEM163Q8TC26 289 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 TMEM18Q96B42 140 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 MPHOSPH6Q99547 160 aaKnown RBP4.4□□□□□ -1.71
SMC4-223ENST00000493695 GAREM1Q9H706 876 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 ACAD9Q9H845 621 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 TM7SF3Q9NS93 570 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 SLC39A10Q9ULF5 831 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 RAI2Q9Y5P3 530 aa4.4□□□□□ -1.71
SMC4-223ENST00000493695 A0A1B0GVM2 712 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 DYTNA2CJ06 578 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 GRM8O00222 908 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 SYN3O14994 580 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 PLA2G6O60733 806 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 LDLRP01130 860 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 CRIP2P52943 208 aaPredicted RBP4.39□□□□□ -1.71
SMC4-223ENST00000493695 CDK18Q07002 472 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 DLG1Q12959 904 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 RBBP5Q15291 538 aaKnown RBP4.39□□□□□ -1.71
SMC4-223ENST00000493695 UNQ6126/PRO20091Q6UXV3 157 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 WDR5BQ86VZ2 330 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 GATAD2AQ86YP4 633 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 NAGSQ8N159 534 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 PGBD5Q8N414 524 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 KIAA1191Q96A73 305 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 FEM1CQ96JP0 617 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 CADM1Q9BY67 442 aaKnown RBP4.39□□□□□ -1.71
SMC4-223ENST00000493695 WDR12Q9GZL7 423 aaKnown RBP4.39□□□□□ -1.71
SMC4-223ENST00000493695 PLCB1Q9NQ66 1216 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 PAM16Q9Y3D7 125 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 PCDHGB2Q9Y5G2 931 aa4.39□□□□□ -1.71
SMC4-223ENST00000493695 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 TULP2O00295 520 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 ZG16O60844 167 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 TBX6O95947 436 aaPredicted RBP4.38□□□□□ -1.71
SMC4-223ENST00000493695 CH25HO95992 272 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 CRYAAP02489 173 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 KCNA5P22460 613 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 SKIV2L2P42285 1042 aaKnown RBP4.38□□□□□ -1.71
SMC4-223ENST00000493695 CYP4A11Q02928 519 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 MPEG1Q2M385 716 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 GXYLT1Q4G148 440 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 HIST2H2BCQ6DN03 193 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 ZDHHC23Q8IYP9 409 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 C18orf8Q96DM3 657 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 OR1F2PQ96R84 312 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 NPFFR1Q9GZQ6 430 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 CERS4Q9HA82 394 aa4.38□□□□□ -1.71
SMC4-223ENST00000493695 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.37□□□□□ -1.71
SMC4-223ENST00000493695 ASNA1O43681 348 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 CCNT1O60563 726 aaKnown RBP4.37□□□□□ -1.71
SMC4-223ENST00000493695 CBX6O95503 412 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 PAK4O96013 591 aaPredicted RBP4.37□□□□□ -1.71
SMC4-223ENST00000493695 LDHAP00338 332 aaKnown RBP4.37□□□□□ -1.71
SMC4-223ENST00000493695 PPM1AP35813 382 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 DPP6P42658 865 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 HSPA7P48741 367 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 NLRP5P59047 1200 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 PKP1Q13835 747 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 DHX34Q14147 1143 aaKnown RBP4.37□□□□□ -1.71
SMC4-223ENST00000493695 RPS6KA2Q15349 733 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 TEX45Q8NA69 505 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 TBC1D22AQ8WUA7 517 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 DDX23Q9BUQ8 820 aaKnown RBP4.37□□□□□ -1.71
SMC4-223ENST00000493695 STK33Q9BYT3 514 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 EVA1AQ9H8M9 152 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 TMEM51Q9NW97 253 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 DHDHQ9UQ10 334 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 DAAM1Q9Y4D1 1078 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 MMP24Q9Y5R2 645 aa4.37□□□□□ -1.71
SMC4-223ENST00000493695 A0A0U1RQJ8 604 aa4.36□□□□□ -1.71
SMC4-223ENST00000493695 DDAH2O95865 285 aa4.36□□□□□ -1.71
SMC4-223ENST00000493695 ABCB4P21439 1286 aa4.36□□□□□ -1.71
SMC4-223ENST00000493695 ATP12AP54707 1039 aa4.36□□□□□ -1.71
SMC4-223ENST00000493695 ERVK11-1P61568 191 aa4.36□□□□□ -1.71
SMC4-223ENST00000493695 OS9Q13438 667 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms