RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 FGF10O15520 208 aaPredicted RBP13.9□□□□□ -0.18
PDCD11-206ENST00000493610 SLC7A4O43246 635 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 PRPSAP2O60256 369 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 TMCC1O94876 653 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 ETFBP38117 255 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 HCAR3P49019 387 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 TAS2R40P59535 323 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 SMTNL2Q2TAL5 461 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 ATP13A4Q4VNC1 1196 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 PPM1JQ5JR12 505 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 ATXN7L2Q5T6C5 722 aaPredicted RBP13.9□□□□□ -0.18
PDCD11-206ENST00000493610 POLNQ7Z5Q5 900 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 OR6K2Q8NGY2 324 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 GRIN3AQ8TCU5 1115 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 GANCQ8TET4 914 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 CELF6Q96J87 481 aaKnown RBP13.9□□□□□ -0.18
PDCD11-206ENST00000493610 SLC6A18Q96N87 628 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 EIF3CQ99613 913 aaKnown RBP13.9□□□□□ -0.18
PDCD11-206ENST00000493610 TM6SF2Q9BZW4 377 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 CATSPERBQ9H7T0 1116 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 SUSD2Q9UGT4 822 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 IL36AQ9UHA7 158 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 ANAPC7Q9UJX3 599 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 ZFR2Q9UPR6 939 aaKnown RBP13.9□□□□□ -0.18
PDCD11-206ENST00000493610 SPTBN2O15020 2390 aa13.9□□□□□ -0.18
PDCD11-206ENST00000493610 CNOT1A5YKK6 2376 aaKnown RBP13.89□□□□□ -0.19
PDCD11-206ENST00000493610 KNL1Q8NG31 2342 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 INSIG1O15503 277 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 PRAMEF11O60813 436 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 RNF8O76064 485 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 KCNK5O95279 499 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 PEX11BO96011 259 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 TPM3P06753 285 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 CD48P09326 243 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 RGRP47804 291 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 NDST2P52849 883 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 PIGHQ14442 188 aaPredicted RBP13.89□□□□□ -0.19
PDCD11-206ENST00000493610 KIF19Q2TAC6 998 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 PARP15Q460N3 678 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 FAM46CQ5VWP2 391 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 PARS2Q7L3T8 475 aaKnown RBP13.89□□□□□ -0.19
PDCD11-206ENST00000493610 RABEPKQ7Z6M1 372 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 DSG4Q86SJ6 1040 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 VPS36Q86VN1 386 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 ZNF564Q8TBZ8 553 aaPredicted RBP13.89□□□□□ -0.19
PDCD11-206ENST00000493610 SNX19Q92543 992 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 HEPHQ9BQS7 1158 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 GTPBP2Q9BX10 602 aaKnown RBP13.89□□□□□ -0.19
PDCD11-206ENST00000493610 HDAC8Q9BY41 377 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 NHEJ1Q9H9Q4 299 aaPredicted RBP13.89□□□□□ -0.19
PDCD11-206ENST00000493610 PCDH18Q9HCL0 1135 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 IP6K2Q9UHH9 426 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 FNDC3AQ9Y2H6 1198 aaKnown RBP13.89□□□□□ -0.19
PDCD11-206ENST00000493610 SNX11Q9Y5W9 270 aa13.89□□□□□ -0.19
PDCD11-206ENST00000493610 PCNX2A6NKB5 2137 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 NCOR2Q9Y618 2525 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 LRRC72A6NJI9 287 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 UPK3BL1B0FP48 263 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 UPK3BL2E5RIL1 263 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 C1QTNF3-AMACRE9PGA6 284 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 KPNA3O00505 521 aaPredicted RBP13.88□□□□□ -0.19
PDCD11-206ENST00000493610 KCNK3O14649 394 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 BUB1O43683 1085 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 GSRP00390 522 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 PRNPP04156 253 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 GNSP15586 552 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 AMPD1P23109 780 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 ABL2P42684 1182 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 CTSKP43235 329 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 GRIA4P48058 902 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 PAPOLAP51003 745 aaKnown RBP13.88□□□□□ -0.19
PDCD11-206ENST00000493610 FAM193AP78312 1265 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 MMRN1Q13201 1228 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 FGL2Q14314 439 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 SHBQ15464 509 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 UAP1L1Q3KQV9 507 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 INO80DQ53TQ3 878 aaPredicted RBP13.88□□□□□ -0.19
PDCD11-206ENST00000493610 PPP6R3Q5H9R7 873 aaPredicted RBP13.88□□□□□ -0.19
PDCD11-206ENST00000493610 DBX2Q6ZNG2 339 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 TRIM69Q86WT6 500 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 OR2AP1Q8NGE2 309 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 TEKT4Q8WW24 435 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 CSPG4P5Q96PW8 444 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 CAAP1Q9H8G2 361 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 ZWILCHQ9H900 591 aa13.88□□□□□ -0.19
PDCD11-206ENST00000493610 HECAQ9UBI9 543 aaPredicted RBP13.88□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3DA0A087WVF3 549 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3IA0A087WXS9 549 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3EA0A087X179 549 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3KA0A087X1G2 549 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3FA6NER0 549 aaPredicted RBP13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3LB9A6J9 549 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 MUSKO15146 869 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 PROSCO94903 275 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TMEM253P0C7T8 217 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 TBC1D3HP0C7X1 549 aa13.87□□□□□ -0.19
PDCD11-206ENST00000493610 CSRP1P21291 193 aaKnown RBP13.87□□□□□ -0.19
PDCD11-206ENST00000493610 ITGB7P26010 798 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms