RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 EXOC2Q96KP1 924 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 NELL2Q99435 816 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 FRMD8P1Q9BZ68 369 aaPredicted RBP17.49■□□□□ 0.39
LIME1-208ENST00000493265 TM6SF2Q9BZW4 377 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 SEMA4AQ9H3S1 761 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 NT5MQ9NPB1 228 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 RBM22Q9NW64 420 aaKnown RBP eCLIP17.49■□□□□ 0.39
LIME1-208ENST00000493265 THAP10Q9P2Z0 257 aaPredicted RBP17.49■□□□□ 0.39
LIME1-208ENST00000493265 RNF14Q9UBS8 474 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 STARD13Q9Y3M8 1113 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 STON1Q9Y6Q2 735 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 CACNA1IQ9P0X4 2223 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 CHD5Q8TDI0 1954 aa17.49■□□□□ 0.39
LIME1-208ENST00000493265 SGK1O00141 431 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 RNF103O00237 685 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 PEX11BO96011 259 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 EPHX1P07099 455 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 PRKCHP24723 683 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 MMP13P45452 471 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 NRLP54845 237 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 RHOAP61586 193 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 SLC20A2Q08357 652 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 ZBTB17Q13105 803 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 FBXO43Q4G163 708 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 SDE2Q6IQ49 451 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 C22orf39Q6P5X5 142 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 ZC3H14Q6PJT7 736 aaKnown RBP17.48■□□□□ 0.39
LIME1-208ENST00000493265 Q6ZVU0 165 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 GSTA5Q7RTV2 222 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 C1orf210Q8IVY1 113 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 RYBPQ8N488 228 aaPredicted RBP17.48■□□□□ 0.39
LIME1-208ENST00000493265 FAM71DQ8N9W8 422 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 TXNDC5Q8NBS9 432 aaKnown RBP17.48■□□□□ 0.39
LIME1-208ENST00000493265 RMDN1Q96DB5 314 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 MYO19Q96H55 970 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 ZNF599Q96NL3 588 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 AGAP3Q96P47 875 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 FERMT1Q9BQL6 677 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 HOMER3Q9NSC5 361 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 POLR3BQ9NW08 1133 aaPredicted RBP17.48■□□□□ 0.39
LIME1-208ENST00000493265 SLC8A2Q9UPR5 921 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 HS3ST2Q9Y278 367 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 MRFAP1Q9Y605 127 aa17.48■□□□□ 0.39
LIME1-208ENST00000493265 TTC24A2A3L6 582 aaPredicted RBP17.47■□□□□ 0.39
LIME1-208ENST00000493265 BCLAF3A2AJT9 711 aaKnown RBP17.47■□□□□ 0.39
LIME1-208ENST00000493265 F5H423 210 aaPredicted RBP17.47■□□□□ 0.39
LIME1-208ENST00000493265 PHF2O75151 1096 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 IFNB1P01574 187 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 HNRNPLP14866 589 aaKnown RBP eCLIP17.47■□□□□ 0.39
LIME1-208ENST00000493265 NTSR1P30989 418 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 RENBPP51606 427 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 MAXP61244 160 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 MRPS21P82921 87 aaKnown RBP17.47■□□□□ 0.39
LIME1-208ENST00000493265 CKAP4Q07065 602 aaKnown RBP17.47■□□□□ 0.39
LIME1-208ENST00000493265 C2orf54Q08AI8 447 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 WHAMMP3Q1A5X7 153 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 ATXN7L2Q5T6C5 722 aaPredicted RBP17.47■□□□□ 0.39
LIME1-208ENST00000493265 TTC27Q6P3X3 843 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 PKN3Q6P5Z2 889 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 ZNF687Q8N1G0 1237 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 BBS5Q8N3I7 341 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 IL17RCQ8NAC3 791 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 TSEN2Q8NCE0 465 aaKnown RBP17.47■□□□□ 0.39
LIME1-208ENST00000493265 DDX47Q9H0S4 455 aaKnown RBP17.47■□□□□ 0.39
LIME1-208ENST00000493265 SEPT3Q9UH03 358 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 FRYLO94915 3013 aa17.47■□□□□ 0.39
LIME1-208ENST00000493265 OTOGLQ3ZCN5 2332 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 MUSKO15146 869 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 ATP9BO43861 1147 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 STK10O94804 968 aaKnown RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 PTPN3P26045 913 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 COILP38432 576 aaPredicted RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 GDF10P55107 478 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 IFI35P80217 286 aaPredicted RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 ZNF33AQ06730 810 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 WASHC5Q12768 1159 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 HNRNPDQ14103 355 aaKnown RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 RFTN1Q14699 578 aaPredicted RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 E2F5Q15329 346 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 OASLQ15646 514 aaKnown RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 INO80DQ53TQ3 878 aaPredicted RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 CCDC137Q6PK04 289 aaKnown RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 TRMT11Q7Z4G4 463 aaKnown RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 PRUNE1Q86TP1 453 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 TAB3Q8N5C8 712 aaPredicted RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 OR6K2Q8NGY2 324 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 CCDC26Q8TAB7 109 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 CASKIN2Q8WXE0 1202 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 MAML1Q92585 1016 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 ZNF419Q96HQ0 510 aaPredicted RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 USP29Q9HBJ7 922 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 KLHL8Q9P2G9 620 aaPredicted RBP17.46■□□□□ 0.39
LIME1-208ENST00000493265 LHX3Q9UBR4 397 aa17.46■□□□□ 0.39
LIME1-208ENST00000493265 MUC22E2RYF6 1773 aaPredicted RBP17.45■□□□□ 0.38
LIME1-208ENST00000493265 ATG2BQ96BY7 2078 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 EDDM13A0A1B0GTR0 161 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 MTSS1O43312 755 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 SYNCRIPO60506 623 aaKnown RBP17.45■□□□□ 0.38
LIME1-208ENST00000493265 GJB3O75712 270 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 HLA-DQB2P05538 268 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms