RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SCML2Q9UQR0 700 aa7.45□□□□□ -1.22
NPHP3-208ENST00000490993 KLF11O14901 512 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 GSTA4O15217 222 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CLDN11O75508 207 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ENDOD1O94919 500 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CYP11A1P05108 521 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PFKMP08237 780 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CREB1P16220 341 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ITGALP20701 1170 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ATP5F1P24539 256 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 DNAJB1P25685 340 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 WDR4P57081 412 aaKnown RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 TAF10Q12962 218 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CERCAMQ5T4B2 595 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 STK40Q8N2I9 435 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 DNAJC9Q8WXX5 260 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PBXIP1Q96AQ6 731 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 SGF29Q96ES7 293 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 TMEM237Q96Q45 408 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 RNF208Q9H0X6 261 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CATSPERZQ9NTU4 200 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 THEGQ9P2T0 379 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 DPP7Q9UHL4 492 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 SLC25A13Q9UJS0 675 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ATP11BQ9Y2G3 1177 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ZNF510Q9Y2H8 683 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CFAP99D6REC4 459 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 GABRDO14764 452 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 AIM2O14862 343 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 MSI1O43347 362 aaKnown RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 VPS4BO75351 444 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 INHAP05111 366 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HIST1H2AGP0C0S8 130 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HIST1H2ADP20671 130 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PPM1AP35813 382 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CPA2P48052 419 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CDK18Q07002 472 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ARHGEF7Q14155 803 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 MSS51Q4VC12 460 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 LIPMQ5VYY2 423 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CCDC149Q6ZUS6 474 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 TMC7Q7Z402 723 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 GLT6D1Q7Z4J2 308 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ST13P4Q8IZP2 240 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ICA1LQ8NDH6 482 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HIPK4Q8NE63 616 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 TMEM40Q8WWA1 233 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 TRIB2Q92519 343 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 TMA16Q96EY4 203 aaKnown RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PIWIL1Q96J94 861 aaKnown RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HIST1H2AHQ96KK5 128 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HIST1H2AJQ99878 128 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 H2AFJQ9BTM1 129 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PIDD1Q9HB75 910 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 MRPL17Q9NRX2 175 aaKnown RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CLIC5Q9NZA1 410 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 SLC27A5Q9Y2P5 690 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 RAP2CQ9Y3L5 183 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 FAM155BO75949 473 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CKMP06732 381 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ACADSP16219 412 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CCND3P30281 292 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HMOX2P30519 316 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 IL10RBQ08334 325 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PKDCCQ504Y2 493 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 AFTPHQ6ULP2 937 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 C6orf89Q6UWU4 347 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 AGMOQ6ZNB7 445 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ZCCHC23Q6ZST2 131 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 SCML4Q8N228 414 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 LPCAT1Q8NF37 534 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 MAGEC3Q8TD91 643 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 DDI1Q8WTU0 396 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PGAP3Q96FM1 320 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 OSBPL7Q9BZF2 842 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 MPP6Q9NZW5 540 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CRLS1Q9UJA2 301 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 FBXO5Q9UKT4 447 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 TCAF1Q9Y4C2 921 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ATAD5Q96QE3 1844 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PTGESO14684 152 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HCRTO43612 131 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 SH3BP5O60239 455 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CBX6O95503 412 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 OR4Q2P0C623 313 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 CASP2P42575 452 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ST8SIA6P61647 398 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 RBBP5Q15291 538 aaKnown RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PDCD2Q16342 344 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 SDHAF4Q5VUM1 108 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HFE2Q6ZVN8 426 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PIWIL4Q7Z3Z4 852 aaKnown RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 HJURPQ8NCD3 748 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 SPOCK2Q92563 424 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PLD4Q96BZ4 506 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ZNF333Q96JL9 665 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 PPP1R36Q96LQ0 422 aa7.44□□□□□ -1.22
NPHP3-208ENST00000490993 ACE2Q9BYF1 805 aaPredicted RBP7.44□□□□□ -1.22
NPHP3-208ENST00000490993 R3HDMLQ9H3Y0 253 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms