RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 NRP2O60462 931 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 NDUFS3O75489 264 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 S100A5P33763 92 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 MYBPC3Q14896 1274 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CCDC85BQ15834 202 aaPredicted RBP12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 ATP6AP1LQ52LC2 224 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 TMEM192Q8IY95 271 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 AHI1Q8N157 1196 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CAPSLQ8WWF8 208 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 COX4I2Q96KJ9 171 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 BDH2Q9BUT1 245 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 C1orf21Q9H246 121 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 MRGBPQ9NV56 204 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 MFN2O95140 757 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 RBP1P09455 135 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 ETV4P43268 484 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 GNA12Q03113 381 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 TRIM25Q14258 630 aaKnown RBP12.99□□□□□ -0.33
SHOX2-205ENST00000490689 DMC1Q14565 340 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 PFKFB4Q16877 469 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 NEPROQ6NW34 567 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 ABHD15Q6UXT9 468 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CHST15Q7LFX5 561 aaPredicted RBP12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CCDC185Q8N715 623 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 OR52K2Q8NGK3 314 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 FBXO30Q8TB52 745 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CRYGNQ8WXF5 182 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CCDC126Q96EE4 140 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 TMEM134Q9H6X4 195 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 NDFIP2Q9NV92 336 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 SLC8A2Q9UPR5 921 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 C2CD4BA6NLJ0 364 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 WNT10BO00744 389 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 HS6ST1O60243 411 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 ITGA7Q13683 1181 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 ZNF235Q14590 738 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 KIAA0319LQ8IZA0 1049 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 PLD6Q8N2A8 252 aaKnown RBP12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CLEC4CQ8WTT0 213 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 PEBP4Q96S96 227 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 PCDHGC3Q9UN70 934 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 AAR2Q9Y312 384 aaKnown RBP12.99□□□□□ -0.33
SHOX2-205ENST00000490689 TELO2Q9Y4R8 837 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 FGF3P11487 239 aaPredicted RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 HDCP19113 662 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 JAK1P23458 1154 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 UBE3AQ05086 875 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 GK3PQ14409 553 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 PCLAFQ15004 111 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 ZNF410Q86VK4 478 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 RAD21L1Q9H4I0 556 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 RERGLQ9H628 205 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 SEMA4BQ9NPR2 832 aaPredicted RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 ABCB10Q9NRK6 738 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 ANAPC2Q9UJX6 822 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 RNF112Q9ULX5 631 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 MAGEB16A2A368 324 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 RGS5O15539 181 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 CHRM3P20309 590 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 VPS26BQ4G0F5 336 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 CMPK2Q5EBM0 449 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 FOXB2Q5VYV0 432 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 METTL7BQ6UX53 244 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 PIWIL4Q7Z3Z4 852 aaKnown RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 SHKBP1Q8TBC3 707 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 PIWIL1Q96J94 861 aaKnown RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 ZFYVE19Q96K21 471 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 SIGLEC10Q96LC7 697 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 C1orf50Q9BV19 199 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 C6orf62Q9GZU0 229 aaPredicted RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 NT5MQ9NPB1 228 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 DTLQ9NZJ0 730 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 LIMD1Q9UGP4 676 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 A0A1W2PPW3 197 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 TPSB2P20231 275 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 ATP5F1P24539 256 aaPredicted RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 POU4F1Q01851 419 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 TPSAB1Q15661 275 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 POTEHQ6S545 545 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 TMC5Q6UXY8 1006 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 RPS27LQ71UM5 84 aaKnown RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 PIGZQ86VD9 579 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 TMEM130Q8N3G9 435 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 FSTL5Q8N475 847 aaPredicted RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 CANT1Q8WVQ1 401 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 TMIGD2Q96BF3 282 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 MRPL45Q9BRJ2 306 aaKnown RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 GPATCH1Q9BRR8 931 aaKnown RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 MFHAS1Q9Y4C4 1052 aa12.98□□□□□ -0.33
SHOX2-205ENST00000490689 HEMK1Q9Y5R4 338 aaPredicted RBP12.98□□□□□ -0.33
SHOX2-205ENST00000490689 HACD1B0YJ81 288 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 PSMD3O43242 534 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 NPY2RP49146 381 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 TAF6P49848 677 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 MPP1Q00013 466 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 NAB1Q13506 487 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 INSCQ1MX18 579 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms