RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 A0A1W2PQF6 199 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 CFAP69A5D8W1 941 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 TSPAN3O60637 253 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 IGLV3-25P01717 112 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 STIP1P31948 543 aaKnown RBP16.01■□□□□ 0.15
PCCB-218ENST00000490504 GDF10P55107 478 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 GEN1Q17RS7 908 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 HIBCHQ6NVY1 386 aaPredicted RBP16.01■□□□□ 0.15
PCCB-218ENST00000490504 ZC3H18Q86VM9 953 aaKnown RBP16.01■□□□□ 0.15
PCCB-218ENST00000490504 UNC45BQ8IWX7 931 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 CHPFQ8IZ52 775 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 GOLGA6L1Q8N7Z2 621 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 FRMD1Q8N878 549 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 DDI1Q8WTU0 396 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 ZBTB9Q96C00 473 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 SMOC1Q9H4F8 434 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 TMEM51Q9NW97 253 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 BCCIPQ9P287 314 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCCB-218ENST00000490504 TPX2Q9ULW0 747 aaKnown RBP16.01■□□□□ 0.15
PCCB-218ENST00000490504 SLC27A6Q9Y2P4 619 aa16.01■□□□□ 0.15
PCCB-218ENST00000490504 BCLAF3A2AJT9 711 aaKnown RBP16■□□□□ 0.15
PCCB-218ENST00000490504 EEF2KO00418 725 aaKnown RBP16■□□□□ 0.15
PCCB-218ENST00000490504 GFRA2O00451 464 aa16■□□□□ 0.15
PCCB-218ENST00000490504 GDF9O60383 454 aa16■□□□□ 0.15
PCCB-218ENST00000490504 RHOBTB1O94844 696 aa16■□□□□ 0.15
PCCB-218ENST00000490504 HOXB2P14652 356 aa16■□□□□ 0.15
PCCB-218ENST00000490504 AMPD1P23109 780 aa16■□□□□ 0.15
PCCB-218ENST00000490504 ZNF135P52742 658 aaPredicted RBP16■□□□□ 0.15
PCCB-218ENST00000490504 XRCC4Q13426 336 aa16■□□□□ 0.15
PCCB-218ENST00000490504 SF3A2Q15428 464 aaKnown RBP16■□□□□ 0.15
PCCB-218ENST00000490504 CEP128Q6ZU80 1094 aa16■□□□□ 0.15
PCCB-218ENST00000490504 PCGF5Q86SE9 256 aa16■□□□□ 0.15
PCCB-218ENST00000490504 PGBD3Q8N328 593 aa16■□□□□ 0.15
PCCB-218ENST00000490504 FAM71DQ8N9W8 422 aa16■□□□□ 0.15
PCCB-218ENST00000490504 PABPC3Q9H361 631 aaKnown RBP16■□□□□ 0.15
PCCB-218ENST00000490504 WDCPQ9H6R7 721 aa16■□□□□ 0.15
PCCB-218ENST00000490504 C10orf88Q9H8K7 445 aa16■□□□□ 0.15
PCCB-218ENST00000490504 CD248Q9HCU0 757 aa16■□□□□ 0.15
PCCB-218ENST00000490504 TMPRSS4Q9NRS4 437 aa16■□□□□ 0.15
PCCB-218ENST00000490504 CACNA2D2Q9NY47 1150 aa16■□□□□ 0.15
PCCB-218ENST00000490504 STOML2Q9UJZ1 356 aa16■□□□□ 0.15
PCCB-218ENST00000490504 WASH3PC4AMC7 463 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 IRAK2O43187 625 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 IGLV3-27P01718 113 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 CYBBP04839 570 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 P2RY2P41231 377 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 SEMA3BQ13214 749 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 DPYSQ14117 519 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 MORF4L2Q15014 288 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 PLA2G2CQ5R387 149 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 NCBP2-AS2Q69YL0 99 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 KIAA1211LQ6NV74 962 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 RFX8Q6ZV50 586 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 BZW1Q7L1Q6 419 aaKnown RBP15.99■□□□□ 0.15
PCCB-218ENST00000490504 DGLUCYQ7Z3D6 616 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 CCDC25Q86WR0 208 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 CDKL3Q8IVW4 592 aaPredicted RBP15.99■□□□□ 0.15
PCCB-218ENST00000490504 RNF34Q969K3 372 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 GABRG3Q99928 467 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 CDV3Q9UKY7 258 aaKnown RBP15.99■□□□□ 0.15
PCCB-218ENST00000490504 PCDHGA5Q9Y5G8 931 aa15.99■□□□□ 0.15
PCCB-218ENST00000490504 KIAA1549LQ6ZVL6 1849 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.98■□□□□ 0.15
PCCB-218ENST00000490504 GOLGA8KD6RF30 607 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 CREB3O43889 395 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 ZNF806P0C7X5 589 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 GABRG2P18507 467 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 RPL22P35268 128 aaKnown RBP15.98■□□□□ 0.15
PCCB-218ENST00000490504 MPLP40238 635 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 HCAR3P49019 387 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 GBE1Q04446 702 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 EIF4EBP2Q13542 120 aaPredicted RBP15.98■□□□□ 0.15
PCCB-218ENST00000490504 MAP7D1Q3KQU3 841 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 MPPE1Q53F39 396 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 BRMS1LQ5PSV4 323 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 ADGRF1Q5T601 910 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 RNASEH2BQ5TBB1 312 aaKnown RBP15.98■□□□□ 0.15
PCCB-218ENST00000490504 PMS2CLQ68D20 193 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 DENND2CQ68D51 928 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 SDE2Q6IQ49 451 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 TRMT10CQ7L0Y3 403 aaKnown RBP15.98■□□□□ 0.15
PCCB-218ENST00000490504 ERMP1Q7Z2K6 904 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 ZCCHC9Q8N567 271 aaKnown RBP15.98■□□□□ 0.15
PCCB-218ENST00000490504 RTP4Q96DX8 246 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 TKTL2Q9H0I9 626 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 ANLNQ9NQW6 1124 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 RXFP3Q9NSD7 469 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 ETNK2Q9NVF9 386 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 MBD1Q9UIS9 605 aaPredicted RBP15.98■□□□□ 0.15
PCCB-218ENST00000490504 SHOC2Q9UQ13 582 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 RAD54BQ9Y620 910 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 NFS1Q9Y697 457 aa15.98■□□□□ 0.15
PCCB-218ENST00000490504 GOLGA6L7A0A1B0GV03 622 aa15.97■□□□□ 0.15
PCCB-218ENST00000490504 KCNN4O15554 427 aa15.97■□□□□ 0.15
PCCB-218ENST00000490504 LATS1O95835 1130 aa15.97■□□□□ 0.15
PCCB-218ENST00000490504 HOXD9P28356 352 aaPredicted RBP15.97■□□□□ 0.15
PCCB-218ENST00000490504 SGSHP51688 502 aa15.97■□□□□ 0.15
PCCB-218ENST00000490504 EIF3BP55884 814 aaKnown RBP15.97■□□□□ 0.15
PCCB-218ENST00000490504 TBX4P57082 545 aa15.97■□□□□ 0.15
PCCB-218ENST00000490504 TPI1P60174 286 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms