RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 UFM1P61960 85 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 EFNB1P98172 346 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 PTP4A2Q12974 167 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 PKP1Q13835 747 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 KLF9Q13886 244 aaPredicted RBP4.19□□□□□ -1.74
CD46-216ENST00000490278 EDRF1Q3B7T1 1238 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 ZNF667Q5HYK9 610 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 ASPHD1Q5U4P2 390 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 FAAH2Q6GMR7 532 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 H1FNTQ75WM6 255 aaPredicted RBP4.19□□□□□ -1.74
CD46-216ENST00000490278 RRM2BQ7LG56 351 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 MAATS1Q7Z4T9 603 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 MRPL10Q7Z7H8 261 aaKnown RBP4.19□□□□□ -1.74
CD46-216ENST00000490278 PIP4P1Q86T03 277 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 SERPINA11Q86U17 422 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 ZNF575Q86XF7 245 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 TMC8Q8IU68 726 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 ZDHHC23Q8IYP9 409 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 ARFGAP1Q8N6T3 406 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 LRRC57Q8N9N7 239 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 PPHLN1Q8NEY8 458 aaKnown RBP4.19□□□□□ -1.74
CD46-216ENST00000490278 NFKBIDQ8NI38 313 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 KIF1BPQ96EK5 621 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 MPHOSPH8Q99549 860 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 TMEM79Q9BSE2 394 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 DECR2Q9NUI1 292 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 PLEKHB1Q9UF11 243 aaPredicted RBP4.19□□□□□ -1.74
CD46-216ENST00000490278 PCDHA12Q9UN75 941 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 HS3ST3B1Q9Y662 390 aa4.19□□□□□ -1.74
CD46-216ENST00000490278 A0A096LPK6 155 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.18□□□□□ -1.74
CD46-216ENST00000490278 DNAJC9-AS1A6NH13 148 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 ZC3H11AO75152 810 aaKnown RBP eCLIP4.18□□□□□ -1.74
CD46-216ENST00000490278 PRF1P14222 555 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 COX7A2P14406 83 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 TNFSF8P32971 234 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 ARL1P40616 181 aaPredicted RBP4.18□□□□□ -1.74
CD46-216ENST00000490278 ME1P48163 572 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 ALDH7A1P49419 539 aaKnown RBP4.18□□□□□ -1.74
CD46-216ENST00000490278 CYP4A11Q02928 519 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 RABEP1Q15276 862 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 ETFDHQ16134 617 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 MANEAQ5SRI9 462 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 TMEM81Q6P7N7 255 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 INO80CQ6PI98 192 aaPredicted RBP4.18□□□□□ -1.74
CD46-216ENST00000490278 CHD1LQ86WJ1 897 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 GPSM1Q86YR5 675 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 CAMK1DQ8IU85 385 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 FAM217AQ8IXS0 508 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 KDM1BQ8NB78 822 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 C11orf65Q8NCR3 313 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 ZMIZ2Q8NF64 920 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 OR4N2Q8NGD1 307 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 GDPD5Q8WTR4 605 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 TMEM174Q8WUU8 243 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 TMEM170AQ8WVE7 144 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 ZNF333Q96JL9 665 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 LBHD1Q9BQE6 289 aaPredicted RBP4.18□□□□□ -1.74
CD46-216ENST00000490278 B3GNT4Q9C0J1 378 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 SPRTNQ9H040 489 aaPredicted RBP4.18□□□□□ -1.74
CD46-216ENST00000490278 SLC25A18Q9H1K4 315 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 MAP6D1Q9H9H5 199 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 FZD3Q9NPG1 666 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 BABAM1Q9NWV8 329 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 KCND2Q9NZV8 630 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 MPP6Q9NZW5 540 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 SEL1LQ9UBV2 794 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 SARDHQ9UL12 918 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 CAMK2AQ9UQM7 478 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 NAALADL1Q9UQQ1 740 aa4.18□□□□□ -1.74
CD46-216ENST00000490278 TEX13CA0A0J9YWL9 993 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 A0A1W2PPH5 198 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 GAGE12JA6NER3 117 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 HSPB6O14558 160 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 PPEF2O14830 753 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 MDM4O15151 490 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 NDUFB8O95169 186 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 RTN3O95197 1032 aaPredicted RBP4.17□□□□□ -1.74
CD46-216ENST00000490278 EPN2O95208 641 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 TBX18O95935 607 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 IFNA2P01563 188 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 KLKB1P03952 638 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 MYZAPP0CAP1 466 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 RFC1P35251 1148 aaPredicted RBP4.17□□□□□ -1.74
CD46-216ENST00000490278 GPR12P47775 334 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 PLCD1P51178 756 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 YWHAZP63104 245 aaKnown RBP4.17□□□□□ -1.74
CD46-216ENST00000490278 SLC18A2Q05940 514 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 SERTAD4-AS1Q5TG53 156 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 NCAPH2Q6IBW4 605 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 DSTYKQ6XUX3 929 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 FAM83HQ6ZRV2 1179 aaPredicted RBP4.17□□□□□ -1.74
CD46-216ENST00000490278 MOB3CQ70IA8 216 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 TRAPPC11Q7Z392 1133 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 R3HCC1LQ7Z5L2 792 aaKnown RBP4.17□□□□□ -1.74
CD46-216ENST00000490278 TADA2BQ86TJ2 420 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 FAM160B2Q86V87 743 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 MMP21Q8N119 569 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 HORMAD2Q8N7B1 307 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 HDAC2Q92769 488 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms