RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 HLFQ16534 295 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 NCAPH2Q6IBW4 605 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 FJX1Q86VR8 437 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 OR6Y1Q8NGX8 325 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 TMEM18Q96B42 140 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 KTI12Q96EK9 354 aaPredicted RBP4.03□□□□□ -1.76
HMGN1-218ENST00000490032 FIZ1Q96SL8 496 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 HERC2P3Q9BVR0 1158 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 C1QTNF4Q9BXJ3 329 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 ACAD9Q9H845 621 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 PLEKHA2Q9HB19 425 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 KCNG2Q9UJ96 466 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 SLC45A1Q9Y2W3 748 aa4.03□□□□□ -1.76
HMGN1-218ENST00000490032 IGLV5-52A0A0A0MRZ9 124 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 TARSL2A2RTX5 802 aaKnown RBP4.02□□□□□ -1.77
HMGN1-218ENST00000490032 DENND3A2RUS2 1198 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 E7EVH7 732 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 SEPT4O43236 478 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 KCNJ13O60928 360 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 CSF1P09603 554 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 GJC1P36383 396 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 SKIV2L2P42285 1042 aaKnown RBP4.02□□□□□ -1.77
HMGN1-218ENST00000490032 MTNR1AP48039 350 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 CLCN5P51795 746 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 TUBA1BP68363 451 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 ADORA2A-AS1P86434 159 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 BLMHQ13867 455 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 KIF19Q2TAC6 998 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 EFHC1Q5JVL4 640 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
HMGN1-218ENST00000490032 SYNE3Q6ZMZ3 975 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 H1FNTQ75WM6 255 aaPredicted RBP4.02□□□□□ -1.77
HMGN1-218ENST00000490032 SYT13Q7L8C5 426 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 PATL1Q86TB9 770 aaKnown RBP4.02□□□□□ -1.77
HMGN1-218ENST00000490032 TCP11L2Q8N4U5 519 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 MIGA1Q8NAN2 632 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 OR4N2Q8NGD1 307 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 WFIKKN2Q8TEU8 576 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 TMED6Q8WW62 240 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 SLC39A13Q96H72 371 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 SLC25A33Q9BSK2 321 aa4.02□□□□□ -1.77
HMGN1-218ENST00000490032 A0A087WYN8 130 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 OR6C68A6NDL8 312 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 ITM2AO43736 263 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 STRNO43815 780 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 LDB3O75112 727 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 IGKV3-20P01619 116 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 YWHAQP27348 245 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 GPR12P47775 334 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 PRKAA2P54646 552 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 EEF1A2Q05639 463 aaKnown RBP4.01□□□□□ -1.77
HMGN1-218ENST00000490032 POU5F1BQ06416 359 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 BYSLQ13895 437 aaKnown RBP4.01□□□□□ -1.77
HMGN1-218ENST00000490032 MYBPC2Q14324 1141 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 RPE65Q16518 533 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 RUNDC3AQ59EK9 446 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 USP43Q70EL4 1123 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 NR4A3Q92570 626 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 DUX5Q96PT3 197 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 MSTO1Q9BUK6 570 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 TWSG1Q9GZX9 223 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 PLCB1Q9NQ66 1216 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 SRP68Q9UHB9 627 aaKnown RBP4.01□□□□□ -1.77
HMGN1-218ENST00000490032 ICAM5Q9UMF0 924 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 DHDHQ9UQ10 334 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 CLDN16Q9Y5I7 305 aa4.01□□□□□ -1.77
HMGN1-218ENST00000490032 A0A096LPK6 155 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 HMX3A6NHT5 357 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 FAM157AC9JC47 383 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 FAM155BO75949 473 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 ZNF432O94892 652 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 VEGFAP15692 232 aaPredicted RBP4□□□□□ -1.77
HMGN1-218ENST00000490032 DCTDP32321 178 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 MXI1P50539 228 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 ARHGAP8P85298 464 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 POU3F1Q03052 451 aaPredicted RBP4□□□□□ -1.77
HMGN1-218ENST00000490032 GRSF1Q12849 480 aaKnown RBP eCLIP4□□□□□ -1.77
HMGN1-218ENST00000490032 HDAC1Q13547 482 aaPredicted RBP4□□□□□ -1.77
HMGN1-218ENST00000490032 CTTNQ14247 550 aaKnown RBP4□□□□□ -1.77
HMGN1-218ENST00000490032 CCDC38Q502W7 563 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 C1orf228Q6PIY5 440 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 MYLK4Q86YV6 388 aaPredicted RBP4□□□□□ -1.77
HMGN1-218ENST00000490032 CCDC146Q8IYE0 955 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 SETD9Q8NE22 299 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 NCSTNQ92542 709 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 SDCCAG3Q96C92 435 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 NPFFR1Q9GZQ6 430 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 LHPPQ9H008 270 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 TAF1DQ9H5J8 278 aaPredicted RBP4□□□□□ -1.77
HMGN1-218ENST00000490032 GRHPRQ9UBQ7 328 aa4□□□□□ -1.77
HMGN1-218ENST00000490032 MORC2Q9Y6X9 1032 aaPredicted RBP4□□□□□ -1.77
HMGN1-218ENST00000490032 LOC102724159A0A0B4J2E5 919 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 A0A0U1RQJ8 604 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 A0A1B0GVM2 712 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 PLSCR5A0PG75 271 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 LINC01553A4QN01 128 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 IPO5O00410 1097 aaKnown RBP3.99□□□□□ -1.77
HMGN1-218ENST00000490032 SERPINI2O75830 405 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 DDNO94850 711 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms