RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SUPT20HL1Q3ZLR7 823 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 ARMC4Q5T2S8 1044 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 MANEALQ5VSG8 457 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 GPR139Q6DWJ6 353 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 SLC18B1Q6NT16 456 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 C11orf87Q6NUJ2 197 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 CNSTQ6PJW8 725 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 CPLX2Q6PUV4 134 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 PARS2Q7L3T8 475 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 NEK8Q86SG6 692 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 SDCCAG8Q86SQ7 713 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 RPAINQ86UA6 219 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 NLRP14Q86W24 1093 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 CHSY1Q86X52 802 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 TAGAPQ8N103 731 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 GABPB2Q8TAK5 448 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 RBM17Q96I25 401 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 ZNF845Q96IR2 970 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 DACH2Q96NX9 599 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 NR1H4Q96RI1 486 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 FSD1LQ9BXM9 530 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 STN1Q9H668 368 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 SYNCQ9H7C4 482 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 XPO7Q9UIA9 1087 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 CCNL1Q9UK58 526 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 ADAMTS5Q9UNA0 930 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 SH2B3Q9UQQ2 575 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 KNSTRNQ9Y448 316 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 ATP6V0A2Q9Y487 856 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 FMN1Q68DA7 1419 aa3.38□□□□□ -1.87
DEPDC1-204ENST00000489862 BTBD18B2RXH4 712 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 H0YAE9 185 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 AGPSO00116 658 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 PPP6CO00743 305 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 SYN3O14994 580 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 RRP9O43818 475 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 OR2C1O95371 312 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 BAG2O95816 211 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CSF1RP07333 972 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 THEGLP0DJG4 465 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 PCP11498 1178 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 ADORA2AP29274 412 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 THPOP40225 353 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 VIPR2P41587 438 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CPT1AP50416 773 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 ZNF41P51814 821 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 HOXA4Q00056 320 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CALD1Q05682 793 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 EPS8Q12929 822 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CAMK2DQ13557 499 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 SLC29A2Q14542 456 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 COG2Q14746 738 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 ANKRD1Q15327 319 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 WSCD2Q2TBF2 565 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 MPP7Q5T2T1 576 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 DEPDC1Q5TB30 811 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 FAXCQ5TGI0 409 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 GARNL3Q5VVW2 1013 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 ABLIM2Q6H8Q1 611 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 RAB12Q6IQ22 244 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 ANO7Q6IWH7 933 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 TTI2Q6NXR4 508 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 KIAA1324Q6UXG2 1013 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 Q6ZWC4 215 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 BTN2A1Q7KYR7 527 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 RAB11FIP2Q7L804 512 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CCDC91Q7Z6B0 441 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 ERC1Q8IUD2 1116 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 RASGRP3Q8IV61 690 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 PNLDC1Q8NA58 520 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 OR6J1Q8NGC5 347 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 UTP15Q8TED0 518 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 PIGOQ8TEQ8 1089 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 RPL36ALQ969Q0 106 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 PGAP3Q96FM1 320 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 FEM1CQ96JP0 617 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CABS1Q96KC9 395 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 MOGAT1Q96PD6 335 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 NTPCRQ9BSD7 190 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 HGH1Q9BTY7 390 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 ACAT2Q9BWD1 397 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 SEMA4CQ9C0C4 833 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CXorf36Q9H7Y0 433 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 LTB4R2Q9NPC1 389 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 NRIP3Q9NQ35 241 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 HCFC1R1Q9NWW0 138 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 SLC25A10Q9UBX3 287 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CAPN11Q9UMQ6 739 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 SHOC2Q9UQ13 582 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 BTBD3Q9Y2F9 522 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 RRP15Q9Y3B9 282 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 MAP3K4Q9Y6R4 1608 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 PCF11O94913 1555 aaKnown RBP3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 TSPOAP1O95153 1857 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 A4D1N5 150 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 A8MXE2 369 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 PEX12O00623 359 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 CPLX1O14810 134 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 LDLRAD4O15165 306 aa3.37□□□□□ -1.87
DEPDC1-204ENST00000489862 GLP2RO95838 553 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms